CAPITALBIO MICROARRAY SERVICES
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- Cleopatra Clarke
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1 Microarray Platforms: research publications to October 2011 The publications below illustrate the high quality peer reviewed research undertaken using the Microarray Platform: different microarray applications were printed with a SmartArrayer 136 microarrayer spotter, arrays were then hybridized in the active BioMixer II hybridizer and then signals were detected and analyzed using the 10K-A scanner and 3.0 software. All spotting and hybridization solutions were developed and manufactured by. uses human, mouse and rat whole genome oligonucleotide libraries to manufacture mrna profiling microarrays on our slide substrates. For the customized microarrays, we design specific oligonucleotides for printing onto our array substrates. Publications resulting from clients using our platform service are also listed below. has also recently initiated Roche-Nimblegen services, Agilent services and Sequenom services. Copies of publications are available upon request (please use the appropriate pdf ). CAPITALBIO MICROARRAY SERVICES >10 Factor >5-10 Factor < Type Agilent Platform Source Journal Agilent Rabbit Chen, S., et al., Gene Expression Patterns in Different Wool Densities of Rex Rabbit Using cdna Microarray Nimblegen Platform NimbleGen NimbleGen NimbleGen CGH Whang, Y. et al., The differential effects of aligned electrospun PHBHHx fibers on adipogenic and osteogenic potential of MSCs through the regulation of PPARγ signaling. Yu, P., et al., Detection of copy number variations in rice using array-based comparative genomic hybridization. Zhang, W., et al., Cdk1 is required for the selfrenewal of mouse embryonic stem cells Sequenom Platform Sequenom Sequenom Sequenom Sequenom Sequenom- DNA Methylation Sequenom- DNA Methylation Sequenom- SNP Sequenom- DNA Metylation Zhang, Z. et al., MiR-185 Targets the DNA Methyltransferases 1 and Regulates Global DNA Methylation in human glioma. Guo, X. et al., Epigenetic mechanisms of amyloid-β production in anisomycin-treated SH-SY5Y cells. Yeung, S., et al., P1-4 ALDH3 is a valid instrument for mendelian randomisation studies in alcohol epidemiology the Guangzhou Biobank Cohort Study. Zhao, A., et al., Promoter hypomethylation of COMT in human placenta is not associated with the development of pre-eclampsia Sequenom Platform 河 北 农 业 大 Agricultural Sciences in China, 2011, 10(4): 清 华 大 Biomaterials, 2011, online 中 国 水 稻 研 究 所 首 都 师 范 大 西 南 大 首 都 医 科 大 香 港 大 复 旦 大 生 物 医 研 究 院 BMC Genomics, 2011, 12(1); 372. Journal of Cellular Biochemistry, 2011, 112(3): Molecular Cancer, 2011, 10(1): 124. N/A Neuroscience, 2011,Online Journal of Epidemiology and Community Health, 2011, 65: A69. Molecular human reproduction, 2011, 17: Sequenom Sequenom Sequenom- SNP Sequenom- DNA Metylation Liang, Z., et al., Gestational diabetes mellitus screening based on the gene technique. Wang, L., et al., Relation between hypomethylation of long interspersed nucleotide elements and risk of neural tube defects. 浙 江 大 首 都 儿 研 所 Diabetes Research and Clinical Practice, 2010, on line. American Journal of Clinical Nutrition, 2010, 91: Type Platform Source Journal Man/ rodent mirna Qin, W. et al., MicroRNA-133b is a key promoter of cervical carcinoma development through the activation of the ERK and AKT1 pathways Tsinghua University OncoGene 2011, in press 7.414
2 Capitalbio mirna & gene s ChIP-DSL Deafness mutation HLA mutations mirna & gene s Plant mirna mirna ChIP-DSL Antibody array / Transcription Arabidopsis Arabidopsis Tomato TOM2 Silkworm Blue crab expr/n Yao, T. et al., MiR-21 is involved in cervical squamous cell tumorigenesis and regulates CCL20. Zhang, Q. et al., Inhibited of hematopoietic progenitor kinase 1 associated with loss of jumonji domain containing 3 promoter binding contributes to autoimmunity in systemic lupus erythematosus. Chen, Y. et al., Genetic mutations in nonsyndromic deafness patients of uyghur and han chinese ethnicities in xinjiang, China: a comparative study. Xie, Y. et al., Association between HLA-DRB1 and myasthenia gravis in a northern Han Chinese population. Wang, J. et al., Microarray profiling of monocytic differentiation reveals mirnamrna intrinsic correlation Zhou, Z. et al., Lysosome-associated membrane glycoprotein 3 is involved in influenza A virus replication in human lung epithelial (A549) cells. Zhang, J. et al., Identification of mirnas and Their Target Genes Using Deep Sequencing and Degradome Analysis in Trifoliate Orange [Poncirus trifoliate (L.) Raf]. Tan, X. et al., A Five-microRNA Signature for Squamous Cell Lung Carcinoma (SCC) Diagnosis and Hsa-miR-31 for SCC Prognosis. Li, F. et al., Effects of high-fat diet and regular aerobic exercise on global gene in skeletal muscle of C57BL/6 mice. Shen, L.et al., Exploration of target genes of HOXA13 in esophageal squamous cell carcinoma cell line. Yang, M., et al., Side population cells isolated from human osteosarcoma are enriched with tumor-initiating cells. Xu, X., et al., Development and application of antibody microarray for white spot syndrome virus detection in shrimp. Zou, L., et al., Aurora-A Interacts with AP-2a and Down Regulates Its Transcription Activity. Li, A., et al., Gene profiles of two intraspecific Larix lines and their reciprocal hybrids. Zhao, S., et al., Cytokinin antagonizes ABAsuppression to seed germination of Arabidopsis by down-regulating ABI5. Su, L., et al., Safrole oxide induces human umbilical vein endothelial cell transdifferentiation to 5-hydroxytryptaminergic neuron-like cells through tropomyosin receptor kinase A/cyclooxygenase 2/nuclear kappa B/interleukin 8 signaling. Yang, C., et al., A regulatory gene induces trichome formation and embryo lethality in tomato. Wang, Y., et al., Gene Expression Analysis from Phoxim-induced Domesticated Silkworm (Bombyx mori) by Whole-Genome Oligonucleotide Microarray. Xu, Q., et al., Gene profiles of the swimming crab Portunus trituberculatus exposed to salinity stress. 中 山 大 中 南 大, 湘 雅 二 医 新 疆 医 科 大 第 一 附 属 医 院 首 都 医 科 大 清 华 大 医 中 国 医 科 院 北 京 协 和 医 院 清 华 大 医 天 津 医 科 大 中 国 医 科 院 肿 瘤 医 院 第 四 军 医 大 西 京 医 院 待 定 中 国 医 科 院 北 京 协 和 医 南 开 大 武 汉 大 山 东 大 苏 州 大 上 海 海 洋 大 Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease, 2011, online. Journal of Autoimmunity, 2011, online. Journal of Translational Medicine, 2011, 9(1):154. Journal of Clinical Neuroscience, 2011,online J. Cell Biochem. 2011, 112(9), Virology Journal, 2011,8(1): 384. Molecular Biotechnology, 2011, online. Clinical Cancer Research, 2011, online Metabolism-clinical and Experimental, 2011, Online Cancer Letters, 2011, Online Cancer Science, 2011, Online Chinese Journal of Oceanology & Limnology, 2011, 29(5): PLoS ONE 6(8): e Molecular Biology Reports, 2011, online The Plant Journal, 2011, online. The International Journal of Biochemistry & Cell Biology, 2011, online. Proceedings of the National Academy of Sciences, 2011, 108: Pesticide Biochemistry and Physiology, 2011, online Marine Biology, 2011,online
3 mirna Plant mirna mirna Silkworm /mirna /mirna /mirna mirna Salvia miltiorrhiza cdna Chen, H., et al., Mir-34a Is Upregulated during Liver Regeneration in s and Is Associated with the Suppression of Hepatocyte Proliferation. Jin, W., et al., Microarray-based Analysis of Tomato mirna Regulated by Botrytis cinerea. Lin, W., et al., Genetic and epigenetic X- chromosome variations in a parthenogenetic human embryonic stem cell line. Yan, C., et al., MicroRNA regulation associated chondrogenesis of mouse MSCs grown on polyhydroxyalkanoates. Yan, X., et al., Fascaplysin exert anti-tumor effects through apoptotic and antiangiogenesis pathways in sarcoma mice model. Fan, X., et al., Transcriptional profiling analysis of HMP-treated rats with experimentally induced myocardial infarction. Li, P., et al., A fine balance between CCNL1 and TIMP1 contributes to the development of breast cancer cells. Gan, L., et al., Microarray-based gene profiles of silkworm brains. Li, R., et al., MicroRNA array and microarray evaluation of endometrial receptivity in patients with high serum progesterone levels on the day of hcg administration Wang, J., et al., Microarray profiling of monocytic differentiation reveals mirnamrna intrinsic correlation. Zhang, T., et al., Microvascular endothelial cells play potential immunoregulatory roles in the immune response to foot-and-mouth disease vaccines. Guo, H., et al., MicroRNAs-372/373 promote the of hepatitis B Virus through the targeting of nuclear I/B. Yang, C., et al., The mirna profile of the uveal melanoma. Li, Y., et al., Latexin is downregulated in human gastric carcinomas and exhibits tumor suppressor potential Zhang, Y., et al., mir-125b Is Methylated and Functions as a Tumor Suppressor by Regulating the ETS1 Proto-oncogene in Invasive Breast Cancer Yan, X., et al., Fascaplysin exert anti-tumor effects through apoptotic and antiangiogenesis pathways in sarcoma mice model. Cui, G., et al., Candidate genes involved in tanshinone biosynthesis in hairy roots of Salvia miltiorrhiza revealed by cdna microarray. Yan, L., et al., Knockdown of mir-21 in human breast cancer cell lines inhibits proliferation, in vitro migration and in vivo tumor growth. Chen, Y., et al., cdna microarray analysis and immunohistochemistry reveal a distinct molecular phenotype in serous endometrial cancer compared to endometrioid endometrial cancer. Zhao, M., et al., Global profile of silkworm genes from larval to pupal stages: Toward a comprehensive understanding of 第 二 军 医 大 西 北 农 林 科 技 大 中 山 大 附 属 第 三 医 院 北 京 生 命 科 研 究 所 清 华 大 宁 波 大 清 华 大 吉 林 大 西 南 大 北 京 大 第 三 医 院 清 华 大 / 生 物 芯 片 北 京 国 家 研 究 中 心 北 京 农 院 清 华 大 / 生 物 芯 片 北 京 国 家 研 究 中 心 北 京 同 仁 医 院 北 京 大 肿 瘤 医 院 中 山 大 宁 波 大 中 国 中 医 科 院 中 山 大 北 京 大 人 民 医 院 西 南 大 生 物 技 术 院 PLoS ONE, 2011, 6(5): e Journal of Plant Growth Regulation, 2011, Online Journal of Assisted Reproduction and Genetics, 2011, 28(4): Biomaterials, 2011, 32(27): European Journal of Pharmaceutical Sciences, 2011, 43(4): Journal of Ethnopharmacology, 2011, online Biochemical and Biophysical Research Communications, 2011, 409(2): BMC Neuroscience, 2011, 12(1): 8 Reproductive Biology and Endocrinology, 2011,9(1):29 Journal of Cellular Biochemistry, 2011,0nline Cell Biochemistry and Function, 2011,online Hepatology, 2011, 0nline Science China Life Sciences, 2011, 54(4): BMC Cancer, 2011, 11(1): Cancer Research,2011, 71: European Journal of Pharmaceutical Sciences, 2011, 43(4): Molecular Biology Reports, 2011, 38(4): Breast Cancer Research, 2011, 13(1):R2 Experimental and Molecular Pathology, 2011, 91(1): Insect Science,2011, on line
4 sexual differences. Candida albicans mirna mirna HLA polymorphism mirna mirna mirna mirna mirna mirna Arabidopsis Silkworm mirna mirna / Q-RT-PCR Liang, R., et al., 2-Amino-nonyl-6-methoxyltetralin muriate activity against Candida albicans augments endogenous reactive oxygen species production a microarray analysis study. Meng, X., et al., MicroRNA alteration after arsenic trioxide treatment in HepG-2 cells. Gao, J., et al., MicroRNA during osteogenic differentiation of human multipotent mesenchymal stromal cells from bone marrow. Hu, F., et al., Pilot association study of oxcarbazepine-induced mild cutaneous adverse reactions with HLA-B*1502 allele in Chinese Han population. Wang, Y., et al., Early proliferation alteration and differential gene in human periodontal ligament cells subjected to cyclic tensile stress. Bai, H., et al., Involvement of mir-21 in resistance to daunorubicin by regulating PTEN in the leukaemia K562 cell line. Geng, S., et al., Isolation and identification of a distinct side population cancer cells in the human epidermal squamous cancer cell line A431. Rao, Q., et al., Aberrant microrna in human cervical carcinomas. Sun, Z., et al., Fluoride-induced apoptosis and gene profiling in mice sperm in vivo. Cao, Y., et al., MicroRNA-dependent regulation of PTEN after arsenic trioxide treatment in bladder cancer cell line T24. Liu, Z., et al., Small ncrna and regulation under hypoxia in neural progenitor cells. Wang, C., et al., MiR-29b regulates migration of human breast cancer cells. Li, M., et al., Role of microrna-214 targeting phosphatase and tensin homolog in advanced glycation end product-induced apoptosis delay in monocytes. Zhang, Z., et al., Arabidopsis floral initiator SKB1 confers high salt tolerance by regulating transcription and pre-mrna splicing through altering histone H4R3 and small nuclear ribonucleoprotein LSM4 methylation. Wu, P., et al., Microarray analysis of the gene profile in the midgut of silkworm infected with cytoplasmic polyhedrosis virus. Wang, M., et al., Differential of oncogenic mirnas in proliferating and senescent human fibroblasts. Wang, K.,et al., A microarray-based approach identifies ADP ribosylation -like protein 2 as a target of microrna-16. Zhang, X., et al., Combination of hsa-mir-375 and hsa-mir-142-5p as a predictor for recurrence risk in gastric cancer patients following surgical resection. Whang, N., et al., Hnrnpk, a protein differentially expressed in immature rat ovarian development, is required for normal primordial follicle assembly and development. 第 二 军 医 大 哈 尔 滨 医 科 大 第 一 附 属 医 院 第 四 军 医 大 唐 都 医 院 四 川 大 华 西 医 院 四 川 大 华 西 医 院 上 海 交 通 大 附 属 第 一 人 民 医 院 西 安 交 通 大 中 山 大 附 属 二 院 山 西 农 业 大 哈 尔 滨 医 科 大 第 一 附 属 医 院 军 事 医 科 院 基 础 医 研 究 所 南 京 大 南 京 大 中 国 科 院 遗 传 与 发 育 生 物 研 究 所 江 苏 科 技 大 北 京 师 范 大 南 京 大 北 京 大 肿 瘤 医 院 南 京 医 科 大 FEBS Journal, 2011, 278(7): Journal of Gastroenterology and Hepatology, 2011, 26(1): Journal of Cellular Biochemistry, 2011, on line Seizure, 2011, 20(2): Archives of Oral Biology, 2011,56(2): FEBS Letters, 2011, 585(2): Archives of Dermatological Research, 2011, on line Medical Oncology, 2011, on line Archives of Toxicology, 2011, on line Tumor Biology, 2011, 32(1): Cellular and Molecular Neurobiology, 2011,31(1):1-5 Molecular and Cellular Biochemistry, 2011, on line Journal of immunology, 2011, 186: Plant Cell, 2011, 23: Molecular Biology Reports, 2011, 38(1): Molecular and Cellular Biochemistry, 2011, on line Journal of Biological Chemistry, 2011, 286: Annals of Oncology, 2011, on line. Endocrinology, 2011, 152:
5 2010 Type Platform Source Journal mirna cotton CHIP-DSL E. coli mirna mirna mirna plant virus detection CHIP-DSL Transcription mirna mirna Yao, Y., et al., Molecular classification of human endometrial cancer based on gene profiles from specialized microarrays. Ma, Y., et al., mir-27a regulates the growth, colony formation and migration of pancreatic cancer cells by targeting Sprouty2. Liang, J., et al., Gene of conditioned locomotion and context-specific locomotor sensitization controlled by morphine-associated environment. Miao, W., et al., Transcriptome analysis of Hpa1Xoo transformed cotton revealed constitutive of genes in multiple holera d pathways related to disease resistance. Zu, X., et al., Global mapping of ZBTB7A transcription binding sites in HepG2 cells. Cao, F., et al., An optimized RNA amplification method for prokaryotic profiling analysis. Huang, P., et al., Cloning, identification, and analysis at the stage of gonadal sex differentiation of chicken mir-363 and 363*. Liu, X., et al., Systematic identification of microrna and messenger RNA profiles in hepatitis C virus-infected human hepatoma cells. Zhang,L., et al., microrna-141 is involved in a nasopharyngeal carcinoma-related genes network. Guo, L., et al., Gene profiling of drug-resistant small cell lung cancer cells by combining microrna and cdna analysis. Zhang, Y., et al., Oligonucleotide microarray with a minimal number of probes for the detection and identification of thirteen genera of plant viruses. Tan, J., et al., Genome-wide analysis of Histone H3 Lysine9 modifications in human mesenchymal stem cell osteogenic differentiation. Zhao, M., et al., Epigenetics and SLE: RFX1 downregulation causes CD11a and CD70 over by altering epigenetic modifications in lupus CD4+ T cells. Zhou, X., et al., Downregulation of mir-21 inhibits EGFR pathway and suppresses the growth of human glioblastoma cells independent of PTEN status. Du, B., et al., High glucose down-regulates mir-29a to increase collagen IV production in HK-2 cells. 北 京 大 人 民 医 院 北 京 协 和 医 院 中 科 院 心 理 所 南 京 农 业 大 清 华 大 深 圳 研 究 生 院 哈 尔 滨 医 科 大 中 国 医 科 院 北 京 协 和 医 院 中 南 大 湘 雅 三 院 南 方 医 科 大 中 国 检 验 检 疫 科 研 究 院 东 北 师 范 大 中 南 大 湘 雅 二 医 院 天 津 市 神 经 病 研 究 所 广 州 中 山 大 2009 Type Platform Source Journal Silkworm CHIP-DSL Zhang, D., et al., Sodium ferulate modified gene profile of oxidized low-density lipoprotein-stimulated human umbilical vein endothelial cells. Huang, L., et al., A genome-wide survey for host response of silkworm, Bombyx mori during pathogen Bacillus bombyseptieus infection. Wang, Y., et al., LSD1 is a subunit of the NuRD complex and targets the metastasis 武 汉 大 International Journal of Gynecology and Obstetrics, 2010, 110: Cancer letters, 2010, on line Behavioural Brain Research, 2010, on line. Journal of Experimental Botany, 2010, on line. Cellular & Molecular Biology Letters, 2010, 15: Applied Microbiology and Biotechnology, 2010, 87(1): Acta Biochimica et Biophysica Sinica,2010, on line Virology, 2010, 398: Carcinogenesis, 2010, 31(4): European Journal of Cancer, 2010, on line. Journal of Virological Methods, 2010, on line PloS one, 2009, 4(8): e Journal of Autoimmunity, on line. Laboratory Investigation, 2010, 90: FEBS Letters, 2010, on line Journal of Cardiovascular Pharmacology and Therapeutics, 2009, 14(4): 西 南 大 PloS one, 2009, 4(12): e 北 京 大 医 部 Cell, 2009, 138(4):
6 programs in breast cancer. G. rarus P. chrysosporium fungal exprn Silkworm mirna expn rice mirna expn mirna CHIP-DSL mirna Candida albicans mirna bacteria mirna Yeast plant mirna expn Wei, Y., et al., Combined effects of polyfluorinated and perfluorinated compounds on primary cultured hepatocytes from rare minnow (Gobiocypris rarus) using toxicogenomic analysis. Jiang, M., et al., Gene analysis of Phanerochaete chrysosporium during the transition time from primary growth to secondary metabolism. Liu, S., et al., MicroRNA profiling during the life cycle of the silkworm (Bombyx mori). Jian, X., et al., Identification of novel stressregulated micrornas from Oryza sativa L. Luo, et al., Upregulated BclGL enhances apoptosis of peripheral blood CD4+ T lymphocytes in patients with systemic lupus erythematosus. Qian, K., et al., Hsa-miR-222 is involved in differentiation of endometrial stromal cells in vitro. Li, R., et al., ZIP: a novel transcription repressor, represses EGFR oncogene and suppresses breast carcinogenesis. Lin, Z., et al., mir-23a functions downstream of NFATc3 to regulate cardiac hypertrophy. Guo, N., et al., Antifungal activity of thymol against clinical isolates of fluconazolesensitive and -resistant Candida albicans. Lei, P., et al., Microarray based analysis of microrna in rat cerebral cortex after traumatic brain injury. Zhao, L., et al., Comparison of virulence s and of specific genes between uropathogenic Escherichia coli and avian pathogenic E. coli in a murine urinary tract infection model and a chicken challenge model. Li, S., et al., Differential of MicroRNAs in mouse liver under aberrant energy metabolic status. Wei, Y., et al., Upregulated of cardiac ankyrin repeat protein in human failing hearts due to arrhythmogenic right ventricular cardiomyopathy. Xie, X., et al., Expression of CIITA-related MHCII molecules in tumors linked to prognosis in hepatocellular carcinoma. Tang, Y, et al., Up-regulation of the of costimulatory molecule CD40 in hepatocytes by hepatitis B virus X antigen. Zhang, Q., et al., Cytotoxicity of navones and navonols to a human esophageal squamous cell carcinoma cell line (KYSE-510) by induction of G2/M arrest and apoptosis. Ye, Y., et al., Gaining insight into the response logic of Saccharomyces cerevisiae to heat shock by combining profiles with metabolic pathways. Xue, L., et al., Characterization and profiles of mirnas in rice seeds. 中 科 院 水 生 生 物 研 究 所 西 南 民 族 大 生 命 科 与 技 术 院 重 庆 西 南 大 中 科 院 遗 传 与 发 育 生 物 研 究 所 重 庆 第 三 军 医 大 武 汉 华 中 科 技 大 同 济 医 院 附 属 同 济 医 院 北 京 大 医 部 中 科 院 动 物 研 究 所 吉 林 大 畜 牧 兽 医 院 天 津 医 科 大 总 医 院 扬 州 大 兽 医 院 浙 江 大 药 院 附 属 第 一 医 院 阜 外 医 院 心 血 管 病 研 究 所 北 京 大 人 民 医 院 肝 病 研 究 所 重 庆 第 三 军 医 大 东 北 农 业 大 华 南 理 工 大 生 物 科 与 工 程 院 中 科 院 上 海 生 命 科 研 究 院 植 物 生 Aquatic Toxicology, 2009, on line The Journal of Microbiology, (3): BMC Genomics, 2009, on line Genomics, 2010, 95(1): Clinical Immunology,2009, 132(3): Endocrinology, 2009, on line The EMBO Journal, 2009, on line. Proceedings of the National Academy of Sciences,2009, 106(29): Journal of Medical Microbiology, 2009, 58, Brain research, 2009, 1284 (11): Microbiology, 2009, 155: Journal of Lipid Research, 2009, 50: European Journal of Heart Failure, 2009, 11(6): International Journal Of Oncology, 2009, 34(3): Biochemical and Biophysical Research Communications, 2009, 384(1): Toxicology in Vitro, 2009, 23(5): Biochemical and Biophysical Research Communications, 2009, 385(3): Nucleic Acids Research, 2009, 37(3):
7 mirna Rodent mirna mirna Citrus 微 生 物 定 制 芯 片 - 表 达 谱 mirna Zhang, X., et al., De novo induction of plateletspecific CD4+CD25+ regulatory T cells from CD4+CD25 cells in patients with idiopathic thrombocytopenic purpura. Lin, T., et al. MicroRNA-143 as a tumor suppressor in bladder cancer. Wang, X., et al., Electroacupuncture induced spinal plasticity is linked to multiple gene s in dorsal root deafferented rats. Wang, L., et al., Ethanol exposure induces differential microrna and target gene and teratogenic effects which can be suppressed by folic acid supplementation. Su, H., et al., MicroRNA-101, down-regulated in hepatocellular carcinoma, promotes apoptosis and suppresses tumorigenicity. Liu,Q., et al., Transcriptome analysis of a spontaneous mutant in sweet orange [Citrus sinensis (L.) Osbeck] during fruit development. Li, F., et al., Identification of the immediateearly genes of white spot syndrome virus Chen, X., et al., Role of mir-143 targeting KRAS in colorectal tumorigenesis. 理 生 研 究 所 山 东 大 齐 鲁 医 院 中 山 大 附 属 二 院 四 川 大 华 西 医 院 北 京 大 公 共 卫 生 院 中 山 大 生 命 科 院 作 物 遗 传 改 良 国 家 重 点 实 验 室 国 家 海 洋 局 第 三 海 洋 研 究 所 南 京 大 生 科 院 2008 Type Platform Source Journal bacterial Deafness mutation detection Deafness mutation detection mirna Yeast Maize mirna 宦 海 霞 等, 应 用 DNA 芯 片 技 术 研 究 体 外 表 达 禽 致 病 性 大 肠 杆 菌 可 能 致 病 基 因 Kong, B., et al., Microarray-bioinformatics analysis of altered genomic profiles between human fetal and infant myocardium. Xu, Q., et al., Identification of differential gene profiles of radioresistant lung cancer cell line established by fractionated ionizing radiation in vitro. Zhou, C., et al., Screening of tumor suppressor genes on 1q in Chinese patients with sporadic colorectal cancer. 王 苹 等, 基 因 检 测 在 遗 传 性 耳 聋 中 的 应 用 王 国 建 等, 基 因 芯 片 技 术 在 非 综 合 征 性 耳 聋 快 速 基 因 诊 断 中 的 应 用 研 究 杨 艳 红 等, 小 鼠 着 床 前 胚 胎 mirna 表 达 的 实 验 研 究 叶 燕 锐 等, 酿 酒 酵 母 对 数 生 长 后 期 代 谢 重 构 的 全 基 因 组 表 达 谱 芯 片 分 析 Liu, J., et al., Microarray analysis reveals early responsive genes possibly involved in localized nitrate stimulation of lateral root development in maize (Zea mays L.). Huang, T., et al., Discovery of porcine micrornas and profiling from skeletal muscle tissues during development. 扬 州 大 中 国 医 科 院 中 国 协 和 医 科 大 心 血 管 病 研 究 所 哈 尔 滨 医 科 大 附 属 肿 瘤 医 院 上 海 交 通 大 药 院 吉 林 大 第 一 医 院 解 放 军 总 医 院 耳 鼻 咽 喉 头 颈 外 科 第 四 军 医 大 唐 都 医 院 妇 产 科 华 南 理 工 大 生 物 科 与 工 程 院 中 国 农 业 大 Blood, 2009, 113: Journal of Urology, 2009, 181(3): Journal of Molecular Neuroscience, 2009, 37(2): Reproduction, 2009, 1(1):1-18. Cancer Research, 2009, 69(3): Journal of Experimental Botany, 2009, 60(3): Virology, 2009, 385(1): Oncogene, 2009, 28(10): 微 生 物 报,2008,48(1): Chinese Medical Journal, 2008, 121(14): Chinese Medical Journal, 2008, 121(18): Chinese Medical Journal, 2008, 121(24): 中 华 健 康 管 理 杂 志, 2008, 2(6): 中 华 耳 科 杂 志,2008,6(1):61-66 生 殖 医 杂 志,2008,17(2): 生 物 工 程 报,2008, 24(6): Plant Science, 2008, 175 (3): N/A N/A N/A N/A PLoS one, 2008, 3(9): e
8 Long noncoding mirna expn Silkworm CHIP-DSL Xanthomonas campestris fish- CGH transcription transcription mirna mirna mirna mirna Yeast Transcription Liu, Y., et al., HSP70 is associated with endothelial activation in placental vascular diseases. He, S., et al., MicroRNA-encoding long noncoding RNAs. Shi, L., et al., The balance of reproducibility, sensitivity, and specificity of lists of differentially expressed genes in microarray studies. Cheng, T., et al., Identification and analysis of Toll-related genes in the domesticated silkworm, Bombyx mori. Zhang, Q., et al., Flavones and flavonols exert cytotoxic effects on a human oesophageal adenocarcinoma cell line (OE33) by causing G2/M arrest and inducing apoptosis. Li, Y., et al., Changes in genomic imprinting and gene associated with transformation in a model of human osteosarcoma. Tan, J., et al., The genomic landscapes of histone H3-Lys9 modifications of gene promoter regions and profiles in human bone marrow mesenchymal stem cells. Yang, C., et al., Effects of space flight exposure on cell growth, tumorigenicity and gene in cancer cells. Huang, D., et al., The Zur of Xanthomonas campestris functions as a repressor and an activator of putative zinc homeostasis genes via recognizing two distinct sequences within its target promoters. Liu, Q., et al., mir-16 family induces cell cycle arrest by regulating multiple cell cycle genes. Chen, Z., et al., Transcriptomic and genomic evolution under constant cold in Antarctic notothenioid fishes. Qiao, J., et al., Novel high-throughput profiling of human transcription s and its use for systematic pathway mapping. Sun, Y., et al., Broad profiling of DNA-binding transcription activities improves regulatory network construction in adult mouse tissues. Yang, Y., et al., Determination of micrornas in mouse preimplantation embryos by microarray. Yan, L., et al. MicroRNA mir-21 over in human breast cancer is associated with advanced clinical stage, lymph node metastasis and patient poor prognosis. Yang,L., et al., Microarray analysis of the early N- methy-n-nitrosoureainduced retinal degeneration in rat. Li, W., et al. Diagnostic and prognostic implications of micrornas in human hepatocellular carcinoma. Liao, R., et al., MicroRNAs play a role in the development of human hematopoietic stem cells. Zhao, Y., et al., Development of a novel oligonucleotide array-based transcription assay platform for genome-wide active transcription profiling in Saccharomyces cerevisiae. 山 东 大 省 立 医 院 中 科 院 生 物 物 理 所 美 国 食 品 与 药 品 监 督 管 理 局 西 南 大 生 命 科 院 东 北 农 业 大 食 品 科 系 重 庆 第 三 军 医 大 东 北 师 范 大 中 南 大 湘 雅 医 院 广 西 大 生 命 科 与 技 术 院 北 京 放 射 医 研 究 所 中 国 科 院 遗 传 与 发 育 生 物 研 究 所 清 华 大 生 物 科 与 技 术 系 清 华 大 生 物 科 与 技 术 系 第 四 军 医 大 唐 都 医 院 妇 产 科 中 山 大 肿 瘤 医 院 中 山 大 中 山 眼 科 中 心 上 海 肿 瘤 研 究 所 重 庆 第 三 军 医 大 清 华 大 生 物 科 与 技 术 系 Molecular Medicine, 2008, 14(9-10): BMC Genomics, 2008, 9: BMC Bioinformatics, 2008, Suppl 9: S 10. Developmental and Comparative Immunology, 2008, 32: Food and Chemical Toxicology, 2008, 46(6): Experimental and Molecular Pathology, 2008, 84: Journal of Genetics and Genomics, 2008, 35: Advances in Space Research, 2008, 42: Nucleic Acids Research, 2008, 36(13): Nucleic Acids Research, 2008, 36(16): Proceedings of the National Academy of Sciences, 2008,105(3): Journal of Proteome Research, 2008, 7(7): Journal of Proteome Research, 2008, 7(10): Developmental Dynamics, 2008, 237: RNA, 2008, 14(11): Neuroscience letters, 2008, 418: International Journal of Cancer 2008, 123 (7): Journal of Cellular Biochemistry, 2008, 104(3): Journal of Proteome Research, 2008, 7(3):
9 mirna mirna Viral Gobiocypris rarus expn Guo, Y., et al., Distinctive microrna profiles relating to patient survival in esophageal squamous cell carcinoma. Liu, H., et al., Microarray-based analysis of stress-regulated micrornas in Arabidopsis thaliana. Ye, L., et al., Progressive Changes in Hepatoma Cells Stably Transfected with Hepatitis B Virus X Gene. Teng, Y., et al., Whole-genome transcriptional profiles of a novel marine fish iridovirus, Singapore grouper iridovirus (SGIV) in virusinfected grouper spleen cell cultures and in orange-spotted grouper, Epinephulus coioides. Wei, Y., et al., Toxicogenomic analysis of the hepatic effects of perfluorooctanoic acid on rare minnows (Gobiocypris rarus). 清 华 大 医 系 统 生 物 研 究 中 心 山 东 农 业 大 生 命 科 院 南 开 大 生 命 科 院 中 山 大 生 命 科 院 中 科 院 动 物 研 究 所 Cancer Research, (1): Type Platform Source Journal HLA polymorphism mirna Long noncoding RNA Plant Silkworm mirna Food borne bacterial pathogen Huang., J., et al., Differential gene profiles in acute hepatic failure model in mice infected with MHV-3 virus intervened by antihepatic failure compound Jin, W., et al., Identification of a novel HLA-B allele HLA-B*4070 in a Chinese donor. 李 琼 等,MicroRNA 在 HepG2 肝 癌 细 胞 表 达 差 异 谱 的 研 究 吴 恩 惠 等, 低 氧 对 人 骨 髓 间 充 质 干 细 胞 基 因 表 达 谱 的 影 响 Tang, J., et al., ßig-h3 is involved in the HAb18G/CD147-mediated metastasis process in human hepatoma cells. Ye, Y., et al., Expression of signal transduction genes after differentiation of cord blood stem cells into megakaryocytes. Hao, S., et al., Modulation of 17β-estradiol on the number and cytotoxicity of NK cells in vivo related to MCM and activating receptors. Yin, J., et al., Identifying of new small RNAs by microarrays. Feng, X., et al., Interleukin-27 upregulates major histocompatibility complex class II in primary human endothelial cells through induction of major histocompatibility complex class II transactivator. Qin, Y., et al., Genetic and biochemical studies in yeast reveal that the cotton fibre-specific GhCER6 gene functions in fatty acid elongation. Gong, D., et al., Identification and pattern of the chemosensory protein gene family in the silkworm, Bombyx mori. Wang, C., et al., lysocardiolipin acyltransferase controls the development of hematopoietic and endothelial lineages during in vitro embryonic stem-cell differentiation. He, A., et al., Over of micro ribonucleic acid 29, highly up-regulated in diabetic rats, leads to insulin resistance in 3t3- l1 adipocytes. Wang, X., et al., Development and application of an oligonucleotide microarray for the detection of food-borne bacterial pathogens. 华 中 科 技 大 同 济 医 院 中 华 骨 髓 库 第 三 军 医 大 大 坪 医 院 肿 瘤 中 心 军 事 医 科 院 基 础 医 研 究 所 西 安 第 四 军 医 大 福 建 医 科 大 教 医 院 南 京 大 中 国 医 科 院 协 和 医 科 大 中 国 医 科 院 北 京 大 生 命 科 院 西 南 大 生 命 科 院 北 京 大 生 命 科 院 中 国 医 科 院 北 京 协 和 医 院 天 津 卫 生 环 境 医 研 究 所 RNA, 2008, 14 (5): Intervirology, 2008, 51: Virology,2008, 377: Toxicology and Applied Pharmacology, 2008, 226: Journal of Huazhong University of Science and Technology, 2007, 27(5): Tissue Antigens, 2007, 69(6): 重 庆 医, 2007, 36(20): 生 理 报,2007, 59(2): Experimental Biology and Medicine, 2007, 232: 中 国 组 织 工 程 研 究 与 临 床 康 复, 2007, 11(50): International Immunopharmacology, 2007, 7: N/A N/A N/A N/A Methods, 2007, 43: Immunology, 2007, 68: Journal of Experimental Botany, 2007, 58: Insect Biochemistry and Molecular Biology, 2007, 37: Blood, 2007, 110(10): Molecular Endocrinology, 2007, 21 (11): Applied Microbiology and Biotechnology, 2007, 76:
10 Yeast mirna Xanthomonas campestris CGH microorganism -CGH mirna Cotton Silkworm mirna Li, M., et al., Modulation of gene in cholesterol-lowering effect of electroacupuncture at Fenglong acupoint (ST40): a cdna microarray study. 李 瑞 平 等, 用 原 代 细 胞 培 养 和 人 全 基 因 表 达 谱 芯 片 筛 选 鼻 咽 癌 差 异 表 达 基 因 Liu,X., et al. Genetic and comparative transcriptome analysis of bromodomain 1 in the salt stress response of Saccharomyces cerevisiae. Qin, X., et al., Proliferation and migration mediated by Dkk-1/Wnt/B-catenin cascade in a model of hepatocellular carcinoma cells. Wang, H., et al, Comparison of gene between upland and lowland rice cultivars under water stress using cdna microarray. 孙 建 国 等, 造 血 干 细 胞 相 关 micrornas 的 筛 选 及 其 促 分 行 研 究 Dai, Z., et al., Simulated microgravity inhibits the proliferation and osteogenesis of rat bone marrow mesenchymal stem cells. He, Y., et al., Comparative and functional genomics reveals genetic diversity and determinants of host specificity among reference strains and a large collection of Chinese isolates of the phytopathogen Xanthomonas campestris pv. Campestris. Pang, B., et al., Genetic diversity toxigenic and nontoxigenic Vibrio cholerae Serogroups O1 and O139 revealed by array-based comparative genomic hybridization. Yu, J., et al., Identification of the gene transcription and apoptosis mediated by TGFβ-Smad2/3-Smad4 signaling. Feng, Y., et al., Differentially expressed genes between primary cancer and paired lymph node metastases predict clinical outcome of node-positive breast cancer patients. Yan, N., et al., A microarray for microrna profiling in mouse testis tissues. Lei, K., et al., Identification of MSRA gene on chromosome 8p as a candidate metastasis suppressor for human hepatitis B virus-positive hepatocellular carcinoma. Qin, Y., et al., Saturated very-long-chain fatty acids promotes cotton fiber and Arabidopsis cell elongation by activating ethylene biosynthesis. Xia, Q., et al., Microarray-based gene profiles in multiple tissues of the domesticated silkworm, Bombyx mori. Zhang, Y., et al. PGC-1α induces apoptosis in human epithelial ovarian cancer cells through a PPARγ-dependent pathway. 刘 妍 等, 乙 型 肝 炎 病 毒 基 因 组 转 染 HepG2 细 胞 的 microrna 表 达 研 究 田 志 刚 等, 胆 管 癌 全 基 因 组 表 达 差 异 的 初 步 观 察 四 川 大 生 命 科 院 中 山 大 肿 瘤 防 治 中 心 山 东 大 微 生 物 技 术 国 家 重 点 实 验 室 南 开 大 生 命 科 院 中 国 农 业 大 重 庆 第 三 军 医 大 中 国 航 天 员 科 研 训 练 中 心 广 西 大 生 命 科 与 技 术 院 中 国 疾 病 控 制 与 预 防 中 心 流 行 病 预 防 与 控 制 国 家 重 点 实 验 室 清 华 大 医 系 统 生 物 研 究 中 心 天 津 医 科 大 附 属 肿 瘤 医 院 四 川 大 华 西 医 院 复 旦 大 生 物 医 研 究 院 北 京 大 生 命 科 院 西 南 大 生 命 科 院 南 京 大 解 放 军 第 302 医 院 传 染 病 研 究 所 北 京 大 第 三 医 院 International Journal of Molecular Medicine, 2007, 19: 南 方 医 科 大 报,2007, 27(8): Current Microbiology, 2007, 54 (4): Translational Research, 150 (5): Theoretical and Applied Genetics, 2007, 115: 生 物 化 与 生 物 物 理 进 展,2007,34(11): Cell proliferation, 2007, 40, Genome Biology, 2007, 8: R218. Journal of Bacteriology, 2007, 189: Journal of Cellular Physiology, 2007, 215 (2): Breast Cancer Research and Treatment, 2007, 103: Reproduction, 2007, 134: N/A BMC Cancer, 2007, 7: The Plant Cell (11): Genome Biology, 2007, 8:R162. Cell Research, 2007, Apr; 17(4): 解 放 军 医 杂 志,2007,32 (2):92-95 中 国 微 创 外 科 杂 志,2007, 7(5): N/A N/A
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13 Expression Zhu, L. et al., Identification and characterization of SHORTENED UPPERMOST INTERNODE 1, a gene negatively regulating uppermost internode elongation in rice. Wang, D. et al., Genome-wide temporal-spatial gene profiling of drought responsiveness in rice. 中 国 农 科 院 中 国 农 科 院 Plant Molecular Biology, 2011, online. BMC Plant Biology, 2011, 11(1): Expression Porcine Bacillus subtilis SNP 6.0 / Sequenom SNP SNP 6.0 Hu, F. et al., Identification of rhizome-specific genes by genome-wide differential Analysis in Oryza longistaminata. Wang, J. et al., Integrated Transcriptional and Proteomic Analysis with In Vitro Biochemical Assay Reveal the Important Role of CYP3A46 in T-2 Toxin Hydroxylation in Porcine Primary Hepatocytes. Hu, F., et al., Identification of rhizome-specific genes by genome-wide differential Analysis in Oryza longistaminata. Zhou, T., et al., Global transcriptional responses of Bacillus subtilis to xenocoumacin 1. Hu, Z., et al., A genome-wide association study identifies two new lung cancer susceptibility loci at 13q12.12 and 22q12.2 in Han Chinese. Wu, C., et al., Genome-wide association study identifies three new susceptibility loci for esophageal squamous-cell carcinoma in Chinese populations. Wu, T., et al., Genome-wide analysis reveals the active roles of keratinocytes in oral mucosal adaptive immune response. 中 国 农 科 院 华 南 农 业 大 生 命 科 院 中 国 农 科 院 中 国 农 业 科 院 南 京 医 科 大 中 国 医 科 院 北 京 协 和 医 院 广 州 光 华 口 腔 医 院 BMC Genomics, 2011, 12(1): 149. Molecular & Cellular Proteomics, 2011, 10: M BMC Plant Biology, 2011, 11(1): 18. Journal of Applied Microbiology, 2011, online Nature Genetics, 2011,online Nature Genetics, 2011,online Experimental Biology and Medicine,2011, 236: Chicken mirna SNP 6.0 Pig SNP 6.0 Zou, L., et al., Leaf Rolling Controlled by the Homeodomain Leucine Zipper Class IV Gene Roc5 in. Li, T., et al., A systematic analysis of the skeletal muscle mirna transcriptome of chicken varieties with divergent skeletal muscle growth identifies novel mirnas and differentially expressed mirnas. Liao, M., et al., Gene Expression Profiling of Nephrotoxicity from Copper Nanoparticles in s after Repeated Oral Administration. Zhu, H., et al., X-Linked Congenital Hypertrichosis Syndrome Is Associated with Interchromosomal Insertions Mediated by a -Specific Palindrome near SOX3. Sun, X., et al., Microarray profiling for differential gene in PMSG-hCG stimulated preovulatory ovarian follicles of Chinese Taihu and Large White sows Wang, D., et al., Genome-wide temporalspatial gene profiling of drought responsiveness in rice. Liao, C., et al., Ring chromosome 13 syndrome characterized by high resolution array based comparative genomic hybridization in patient with 47, XYY syndrome: a case report. Xia, J., et al., Expressions of CXCR7/ligands may be involved in oral carcinogenesis. 中 国 农 业 科 院 中 国 医 科 院 基 础 医 研 究 所 广 西 医 科 大 中 国 医 科 院 北 京 协 和 医 院 华 中 农 大 中 国 农 科 院 广 州 医 院 广 州 市 妇 婴 医 院 中 山 大 Plant Physiology, 2011, 156: BMC Genomics, 2011, 12(1):186. Environmental Toxicology and Pharmacology, 2011,online The American Journal of Genetics, 2011, 88(6): BMC Genomics, 2011, 12(1):111 BMC Genomics, 2011, 12(1):149 Journal of Medical Case Reports, 2011, 5:99 Journal of Molecular Histology,2011,42(2): N/A
14 Bovine Zhang, Y., et al., Differentially expressed genes in skeletal muscle tissues from castrated Qinchuan cattle males compared with those from intact males. 西 北 农 林 科 技 大 动 物 科 技 院 Livestock Science,2011,135(1): Gene 1.0 ST Wu, T., et al., Reprogramming of trophoblast stem cells into pluripotent stem cells by Oct4. 北 京 生 命 科 研 究 所 Stem Cells,2011,29(5): SNP 5.0 Wang, F., et al., Genome-wide association identifies a susceptibility locus for coronary artery disease in the Chinese Han population. 华 中 科 技 大 Nature Genetics,2011, on line Jiang, H., et al., Over of SGR results in oxidative stress and lesion-mimic cell death in rice seedlings. 中 国 科 院 华 南 植 物 园 Journal of Integrative Plant Biology,2011,on line Drosophila Shuai, Y., et al., Global gene profiles of MT knockout and wild-type mice in the condition of doxorubicin-induced cardiomyopathy. Chen, S., et al., E2 ligase drad6 regulates DMP53 turnover in Drosophila. 解 放 军 军 事 医 科 院 疾 病 预 防 控 制 所 清 华 大 Toxicology Letters,2011, 200(1-2):77-87 Journal of Biological Chemistry, 2011, 286: Type Platform Source Journal SNP 5.0 Yeast Arabidopsis Zhang, H., et al., Genome-wide association study identifies 1p36.22 as a new susceptibility locus for hepatocellular carcinoma in chronic hepatitis B virus carriers. Li, B., et al., Transcriptome analysis of differential responses of diploid and haploid yeast to ethanol stress. Li, J., et al., The Arabidopsis Nitrate Transporter NRT1.8 Functions in Nitrate Removal from the Xylem Sap and Mediates Cadmium Tolerance. Wang, L., et al., A dynamic gene atlas covering the entire life cycle of rice. 北 京 蛋 白 质 组 研 究 中 心 天 津 大 中 科 院 上 海 生 命 科 院 Nature Genetics, 2010, on line. Journal of Biotechnology, 2010, 148: The Plant Cell, 2010, 22: The Plant Journal, 2010, 61(5): SNP 6.0 Simonson, T., et al., Genetic Evidence for High-Altitude Adaptation in Tibet. 青 海 大 医 院 Science, on line / Pig s Zhang, Z., et al., Genomic profiles in liver of mice exposed to purified terephthalic acid manufacturing wastewater. 南 京 大 Journal of Hazardous Materials, on line Tomato Pig exon Zebrafish Sun, W., et al., Comparative transcriptomic profiling of a salt-tolerant wild tomato species and a salt-sensitive tomato cultivar. Zhou, G., et al., Global comparison of gene profiles between intramuscular and subcutaneous adipocytes of neonatal Landrace pig using microarray. Chen, H., et al., Differential and alternative splicing of genes in lumbar spinal cord of an amyotrophic lateral sclerosis mouse model. Wu, Z., et al., Transcriptome profiling of zebrafish infected with Streptococcus suis. 中 科 院 植 物 研 究 所 华 南 农 业 大 河 北 医 科 大 第 二 医 院 南 京 农 业 大 Plant and Cell Physiology, 2010, 51(6): Meat Science, 2010, on line Brain Research, on line Microbial Pathogenesis, 2010, on line SNP 6.0 Liang, Y., et al., Stem-like cancer cells are inducible by increasing genomic instability in cancer cells. 中 山 大 肿 瘤 中 心 The Journal of Biological Chemistry, 2010, 285(7):
15 Pig Yu, J., et al., Effect of heat stress on the porcine small intestine: A morphological and gene study. 北 京 农 业 大 Comparative Biochemistry and Physiology (Part A), 2010, on line Y, Zhang, et al., Altered global gene s of human placentae subjected to assisted reproductive technology treatments. 南 京 医 科 大 第 一 附 属 医 院 Placenta, 2010, on line 猪 表 达 谱 芯 片 Li, J., et al., Global transcriptional profiles in peripheral blood mononuclear cell during classical swine fever virus infection. 广 西 大 Virus Research, 2010, on line Ning, J., et al., A Raf-like MAPKKK gene DSM1 mediates drought resistance through ROS scavenging in rice. Plant Physiology, 2010, on line Platform Kang, L., et al., ips cells can support full-term development of tetraploid blastocystcomplemented embryos. 北 京 生 命 科 研 究 所 Cell stem cell, 2009, 5(2): Hou, X., et al., A homolog of human skiinteracting protein in rice positively regulates cell viability and stress tolerance. Proceedings of the National Academy of Sciences, 2009,106(15): Zebrafish Pig 500K Chang, M., et al., Zebrafish peptidoglycan recognition protein SC (zfpgrp-sc) mediates multiple intracellular signaling pathways. Zou, X., et al., Different mechanisms of spinal fusion using equine bone protein extract, rhbmp-2 and autograft during the process of anterior lumbar interbody fusion. Lei, S., et al., Genome-wide association scan for stature in Chinese: evidence for specific loci. 中 科 院 水 生 所 奥 胡 斯 大 医 院 / 中 山 大 附 属 医 院 湖 南 师 范 大 Fish & Shellfish Immunology, 2009, 26(2): Biomaterials,2009, 30(6): Genetics, 2009, 125(1): Platform 500K Yang, T., et al., Genome-wide copy-numbervariation study identified a susceptibility Gene, UGT2B17, for osteoporosis. 西 安 交 通 大 及 湖 南 师 范 大 The American Journal of Genetics, 2008, 83: Dong, C., et al., mda-7/il-24 inhibits the proliferation of hematopoietic malignancies in vitro and in vivo. Xiang, Y., et al., Characterization of OsbZIP23 as a key player of bzip transcription family for conferring ABA sensitivity and salinity and drought tolerance in rice. Liu, S., et al., A novel non-lens βγ-crystallin and trefoil complex from amphibian skin and its functional implications. 天 津 血 液 研 究 所 中 科 院 昆 明 动 物 所 Experimental Hematology, 2008, 36(8): Plant Physiology, 2008, 148: PLoS one, 2008, 3: e S. aureus Lu, Y., et al., Global transcriptional response of Staphylococcus aureus to Rhein, a natural plant product. 吉 林 大 Journal of Biotechnology, 2008,135(3): Zhou, Y., et al., Expression profiling of hepatic genes associated with lipid metabolism in nephrotic rats. 北 京 大 医 部 American Journal of physiology-renal physiology, 2008, 295: F662-F Zebrafish Wei, L., et al., Gene profiles in liver of zebrafish treated with microcystin-lr. Hu, H., et al., Characterization of transcription gene SNAC2 conferring cold and salt tolerance in rice. 武 汉 水 生 所 作 物 遗 传 改 良 国 家 重 点 实 验 室 Environmental Toxicology and Pharmacology,2008, 26(1): Plant Molecular Biology, 2008, 67(1-2):
16 S. aureus Wang, D., et al., Global transcriptional profiles of Staphylococcus aureus treated with berberine chloride. 吉 林 大 FEMS Microbiology Letters, 2008, 279(2): Platform C. elegans genome tiling Huang, L., et al., Down-Regulation of a SILENT INFORMATION REGULATOR2- related histone deacetylase gene, OsSRT1, induces DNA fragmentation and cell death in rice. He, H., et al., Mapping the C. elegans noncoding transcriptome with a whole-genome tiling microarray. Sha, G., et al., Differentially expressed genes in human endometrial endothelial cells derived from eutopic endometrium of patients with endometriosis compared with those from patients without endometriosis. 中 科 院 生 物 物 理 所 协 和 医 院 妇 产 科 Plant Physiology, 2007, 144: Genome Research, 2007, 17: Reproduction, 2007, 22 (12): s Source Journal Personal Arrayer 16 BioMixer II RT-Cycler /BioMix II Duan, D. et al., Label-free high-throughput microrna profiling from total RNA. Jiao, Y. et al., Single Nucleotide Polymorphisms Predict Symptom Severity of Autism Spectrum Disorder. Shen, J., et al., Expression of insulin-like growth binding protein-4 (IGFBP-4) in acute pancreatitis induced by l-arginine in mice. Yi, P., et al., Development of a PCR/Ligase Detection Reaction/Nanogold-Based Universal Array Approach for the Detection of Low- Abundant DNA Point Mutations. Han, X., et al., CXCL9 attenuated chemotherapy-induced intestinal mucositis by inhibiting proliferation and reducing apoptosis. Lu, X., et al., Influence of acute cadmium exposure on the liver proteome of a teleost fish, ayu (Plecoglossus altivelis). Wu, Z., et al., Interleukin 1 receptor antagonist reduces lethality and intestinal toxicity of 5- Fluorouracil in a mouse mucositis model. Yang, L., et al., Systematic evaluation of genome-wide methylated DNA enrichment using a CpG island array. 中 国 科 院 苏 州 纳 米 与 仿 生 研 究 所 东 南 大 上 海 交 大 医 院 第 一 人 民 医 院 / 同 第 三 军 医 大 大 坪 医 院 上 海 交 通 大 附 属 第 六 人 民 医 院 宁 波 大 上 海 交 通 大 中 科 院 心 理 研 究 所 Nucleic Acids Research, 2011, Journal of Autism and Developmental Disorders, 2011, online Acta Histochemica, 2011, Online Cell Biochemistry and Biophysics, 2011, 11(1): 18. Biomedicine & Pharmacotherapy, 2011, online. Molecular Biology Reports, 2011, online Biomedicine & Pharmacotherapy,2011, online BMC Genomics, 2011, 12(1): / 耗 材 SmartArrayer 48 Smart Arrayer 48 Han, H., et al., Improvement of the durability of porous silicon through functionalisation for biomedical applications. De Knop, K., et al., Age-related sensitization profiles for hazelnut (Corylus avellana) in a birch-endemic region. Sun, H., et al., Rapid simultaneous screening of seven clinically important enteric pathogens using a magnetic bead based DNA microarray. 南 京 大 University of Antwerp 珠 海 出 入 境 检 验 检 疫 局 Thin Solid Films, 2011, 519(10): Pediatric Allergy and Immunology, 2011, 22(1pt2): e139 e World Journal of Microbiology & Biotechnology, 2011, 27(1):
17 Smart Arrayer 36 / Personal Arrayer 16 RT-Cycler Huang, L., et al., Identification of a gene signature for predicting lymph node metastasis in patients with early stage cervical carcinoma. Verweij, M., et al., Young infants with atopic dermatitis can display sensitization to Cor a 9, an 11S legumin-like seed-storage protein from hazelnut (Corylus avellana). Lv, F., et al., Development of film sensors based on conjugated polymers for copper (II) ion detection. Lu, X., et al., Identification and characterization of a novel cathelicidin from ayu, Plecoglossus altivelis. Liao, L., et al., Molecular characterization of early adenocarcinoma of the uterine cervix by oligonucleotide microarray. 中 山 大 Cancer, 2011, on line University of Antwerp 中 国 科 院 化 研 究 所 宁 波 大 中 山 大 Pediatric Allergy and Immunology, 2011, 22(2): Advanced Functional Materials, 2011, 21(5): Fish & Shellfish Immunology, 2011, on line Archives of Gynecology and Obstetrics, 2011,283(4): Smart Arrayer 48 Pei, J., et al., Covalently derivatized NTA microarrays on porous silicon for multi-mode detection of His-tagged proteins s 10K 10K Smart Arrayer 48 10K Smart Arrayer 48 RT-Cycler LucScan 10K LucScan 10K Wu, Z., et al., Interleukin 1 receptor antagonist reduces lethality and intestinal toxicity of 5- fluorouracil in a mouse mucositis model. Gong, P., et al., Transcriptional profiles of drought-responsive genes in modulating transcription signal transduction, and biochemical pathways in tomato. Zhao, H., et al., Massively parallel display of genomic DNA fragments by rolling-circle amplification and strand displacement amplification on. Chen, Q., et al., A visual -based coimmunoprecipitation technique for analysis of protein-protein interactions. Shi, X., et al., Multiplex detection of CpG methylation using microarray combining with 2 target-selection-padlock probe. Gao, J., et al., Antibody microarray-based strategies for detection of bacteria by lectinconjugated gold nanoparticle probes. Lu, X., et al., Proteomic analysis on the alteration of protein in gills of ayu (Plecoglossus altivelis) associated with salinity change. Ebo, D., et al., Sensitization profiles in birch pollen-allergic patients with and without oral allergy syndrome to apple: lessons from multiplexed component-resolved allergy diagnosis. Ebo, D., et al., Component-resolved diagnosis from latex allergy by microarray s Smart Arrayer 48 LucScan Smart Arrayer 48 RT-cycler Zhu, Y., et al., microrna profiles associated with phosphorus deficiency in white lupin (Lupinus albus L.) Zhao, M., et al., Dual knockdown of N-ras and epiregulin synergistically suppressed the growth of human hepatoma cells. Li, T., et al., Microarray-based Raman spectroscopic assay for kinase inhibition by gold nanoparticle probes. Chen, L., et al., Gold nanoparticle enhanced immuno-pcr for ultrasensitive detection of Hantaan virus nucleocapsid protein. 南 京 大 上 海 交 通 大 Science China Chemistry, 2011,54(3): Biomedicine & Pharmacotherapy, 2010, online. Journal of Experimental Botany,2010,61(13): 东 南 大 Talanta, 2010, on line 南 京 大 东 南 大 Analytical Biochemistry, 2010,on line. Clinica Chimica Acta, 2010, on line 长 春 应 化 所 Talanta, 2010, on line 宁 波 大 University of Antwerp University of Antwerp 南 京 农 业 大 生 科 院 中 国 医 科 院 北 京 协 和 医 院 长 春 应 化 所 武 汉 病 毒 所 Comparative Biochemistry and Physiology - Part D: Genomics and Proteomics,2010,on line. Clinical & Experimental Allergy, 2010, 40: Clinical & Experimental Allergy, 2010, 40 (2): Plant Science, 2010, 178: Biochemical and Biophysical Research Communications, 2009, 387(2): Biosensors and Bioelectronics, 2009, 24(11): Journal of Immunological Methods, 2009, 346(1-2):
18 Smart Arrayer 48 RT-cycler 10K 简 强 等, 凝 集 素 芯 片 技 术 检 测 糖 蛋 白 方 法 的 建 立 及 初 步 应 用 Kang, Y., et al., Antioxidative effect of the herbal remedy Qin Huo Yi Hao and its active component tetramethylpyrazine on high glucosetreated endothelial cells Luo, J., et al., Detection method for methylation density on microarray using methyl-cpg binding domain protein. Li, X., et al., Genotyping of multiple single nucleotide polymorphisms with hyperbranched rolling circle amplification and microarray. 西 北 大 生 命 科 院 中 科 院 上 海 药 物 所 东 南 大 东 南 大 生 物 化 与 生 物 物 理 进 展,2009, 36(2): Life Sciences, 2009, 84(13-14): Analytical Biochemistry, 2009, 387(2): Clinica Chimica Acta, 2009, 399: Type s Source Journal Smart Arrayer 48 10KA/ Smart arrayer 48 Liu, B., et al., Deep-sea thermophilic Geobacillus bacteriophage GVE2 transcriptional profile and proteomic characterization of virions. Wang, J., et al., Characterizing the interaction between aptamers and human IgE by use of surface plasmon resonance. Zhou, D., et al, Methylation pattern analysis using high throughput microarray of solid-phase hyperbranched rolling circle amplification products. Chen, P., et al., Identification of N-glycan of alpha-fetoprotein by lectin affinity microarray. Li, T., et al., Microarray based Raman Smart Arrayer spectroscopic detection with gold nanoparticle 48 probe Type s Sun, L., et al., Microarray-based kinase inhibition assay by gold nanoparticle probes Type s 10K 王 雅 杰 等, 激 光 共 聚 焦 扫 描 仪 检 测 丙 型 肝 炎 蛋 白 芯 片 的 临 床 应 用 Wen, L., et al., Use of a serotype-specific DNA microarray for identification of group B Streptococcus (Streptococcus agalactiae). 国 家 海 洋 局 第 三 海 洋 研 究 所 南 京 大 生 命 分 析 化 教 育 部 重 点 实 验 室 东 南 大 复 旦 大 中 山 医 院 肝 癌 研 究 所 长 春 应 化 所 长 春 应 化 所 首 都 医 科 大 附 属 北 京 天 坛 医 院 南 开 大 泰 达 生 物 技 术 院 Applied Microbiology and Biotechnology, 2008, 80(4): Analytical and Bioanalytical Chemistry, 2008, 390: Electrophoresis, 2008, 29: Journal of Cancer Research and Clinical Oncology, 2008, 134(8): Biosensors and Bioelectronics, 2008,23(7): Analytical Chemistry. 2007, 79(2): 中 华 检 验 医 杂 志,2006,29 (6): Journal of Clinical Microbiology, 2006, 44(4): N/A SOFTWARE 2011 Type Software Source Journal Software MAS Yang, J., et al., Chloroplast-located BjFer1 together with anti-oxidative genes alleviate hydrogen peroxide and hydroxyl radical injury in cytoplasmic male-sterile Brassica juncea. 浙 江 大 Molecular Biology Reports, 2011,Online Software MAS Sun, L., et al., Glycogen Debranching Enzyme 6 (AGL), Enolase 1 (ENOSF1), Ectonucleotide Pyrophosphatase 2 (ENPP2_1), Glutathione S- Transferase 3 (GSTM3_3) and Mannosidase (MAN2B2) Metabolism Computational Network Analysis Between Chimpanzee and Left Cerebrum. 北 京 邮 电 大 Cell Biochemistry and Biophysics, 2011, online Software MAS Yu, J., et al., Integrating mirna and mrna profiles in response to heat stressinduced injury in rat small intestine 中 国 农 业 大 Functional & Integrative Genomics, 2011, 11(2):
19 Software Software Software MAS MAS MAS Sun, J., et al., Integration of gene and topological network techniques to screen a candidate biomarker gene (CBG) for predication of the source water carcinogenesis risks on mouse Mus musculus Wang, L., et al., Cyclin-dependent kinase inhibitor 3 (CDKN3) novel cell cycle computational network between human nonmalignancy associated hepatitis/cirrhosis and hepatocellular carcinoma (HCC) transformation. Zhang, Y., et al., Preliminary evaluation of gene profiles in liver of mice exposed to Taihu Lake drinking water for 90 days. 南 京 大 Ecotoxicology, 2011, Online 清 华 大 Cell Proliferation, 2011,44(3): 南 京 大 Ecotoxicology,2011,on line Software MAS Wang, S. et al., Protein profiling predicts the response to anthracycline and taxanes based neo-adjuvant chemotherapy in breast cancer. 北 京 大 Bio Journal, 2011,5(1): Software MAS Hu, N., et al., MiR-520b Regulates Migration of Breast Cancer Cells by Targeting Hepatitis B X- interacting Protein and Interleukin-8. 南 开 大 Cell Biology,2011,286: Software MAS 3.0 Wang, L., et al., Survivin (BIRC5) cell cycle computational network in human no-tumor hepatitis/cirrhosis and hepatocellular carcinoma transformation. 清 华 大 Journal of Cellular Biochemistry, 2011, on line TOOLS 2011 Type Miscellaneous Source Journal mirna Pathogenic Vibrio spp Shen, E., et al., MicroRNAs Involved in the Mitogen-Activated Protein Kinase Cascades Pathway During Glucose-Induced Cardiomyocyte Hypertrophy. Chen, W., et al., Development of a single base extension-tag microarray for the detection of pathogenic Vibrio species in seafood. 待 定 上 海 交 通 大 The American Journal of Pathology, 2011, online. Applied Microbiology and Biotechnology, 2011, 89(6): 待 定 Scylla paramamosain Zou, Z., et al., EST analysis on the gonad development related organs and microarray screen for differentially expressed genes in mature ovary and testis of Scylla paramamosain. 集 美 大 水 产 院 Comparative Biochemistry and Physiology Part D: Genomics and Proteomics, 2011,6(2): Yin, H., et al., Novel mechanism of ethaselen in poorly differentiated colorectal RKO cell growth inhibition: Simultaneous regulation of TrxR transcription, and enzyme activity. 待 定 Differentiation, 2011, 81(1): Type 2009 Type E. coli E. coli pathogen pathogen Sun, L., et al., P-Cadherin Promotes Liver Metastasis and is Associated with Poor Prognosis in Colon Cancer. 待 定 The American Journal of Pathology, 2011,179(1): Miscellaneous Source Journal Wang, Q., et al., Development of a DNA Microarray for Detection and Serotyping of Enterotoxigenic Escherichia coli. Liu, B., et al., Development of a serogroupspecific DNA microarray for identification of Escherichia coli strains associated with Bovine Septicemia and Diarrhea. 南 开 大 泰 达 生 物 技 术 院 南 开 大 泰 达 生 物 技 术 院 Journal of Clinical Microbiology, 2010, Veterinary Microbiology, 2010, on line. Miscellaneous Source Journal Liu, B., et al., Development of a serogroupspecific DNA microarray for identification of Escherichia coli strains associated with Bovine Septicemia and Diarrhea. Wang, M., et al., Detection of Enterobacter sakazakii and other pathogens associated with powdered infant formula using a DNA microarray. 南 开 大 泰 达 生 物 技 术 院 南 开 大 泰 达 生 物 技 术 院 Veterinary Microbiology, 2009, On line. Journal of Clinical Microbiology, 2009, on line
20 2008 Protein array Miscellaneous Source Journal Zhou, Y., et al., Using the protein to screen agonists and antagonists of the androgen receptor. 协 和 医 科 大 Journal of Biomolecular Screening, 2008; 13: P. falciparum resistance mutation Zhang, G., et al., Multiplex PCR and oligonucleotide microarray for detection of single-nucleotide polymorphisms associated with Plasmodium falciparum drug resistance. 中 国 疾 病 预 防 控 制 中 心 Journal of Clinical Microbiology, 2008, 46(7): Phage display Serotype specific array Miscellaneous Source Journal Bin, Q., et al., A protein microarray prepared with phage-displayed antibody clones. 北 京 大 Biosensors and Bioelectronics, 2007, 22(12): Miscellaneous Source Journal Li, Y., et al., Development of a serotype-specific DNA microarray for identification of some Shigella and pathogenic Escherichia coli strains. 南 开 大 泰 达 生 物 技 术 院 Journal of Clinical Microbiology, 2006, 44(12): Corporation 18 Life Science Parkway, Changping District Beijing, P.R.China Tel: [email protected] Website:
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