20% Backgr. frequency frequency enrichment. Unclassified E+00

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Transcription:

Group A 20% 80% enrichment +/- P-value Unclassified 3044 32 1.03 + 0.00E+00 Group B 10% 2 58% muscle contraction actomyosin structure organization enrichment +/- P-value Muscle contraction (GO:0006936) 15 5 >5 + 3.74E-02 Muscle system process (GO:0003012) 22 6 >5 + 1.59E-02 Myofibril assembly (GO:0030239) 40 7 >5 + 4.64E-02 Striated muscle cell development(go:0055002) 54 8 >5 + 3.84E-02 Muscle cell development (GO:0055001) 54 8 >5 + 3.84E-02 Actomyosin structure organization (GO:0031032) 66 9 >5 + 2.16E-02 Unclassified 3044 49 0.82-0.00E+00

Group C 1 25% female meiotic division mitotic cell cycle 57% enrichment +/- P-value Spindle assembly involved in female meiosis (GO:0007056) 15 6 >5 + 4.87E-02 Female meiotic division(go:0007143) 73 12 4.69 + 3.87E-02 Meiotic cell cycle (GO:0051321) 538 40 2.12 + 2.49E-02 Cell cycle (GO:0007049) 729 54 2.11 + 6.99E-04 Cell cycle process (GO:0022402) 674 49 2.07 + 4.38E-03 Unclassified 3044 114 1.07 + 0.00E+00

Group D negative regulation of histone modification female meiotic division 1% 19% 8% 1% 4% 3% 1% 1% 1% 5% DNA conformation change DNA replication chromosome segregation reciprocal meiotic recombination chromosome condensation 2 10% 3% DNA-templated transcription, initiation negative regulation of gene expression, epigenetic centrosome cycle organelle fission cellular response to DNA damage stimulus mitotic cell cycle negative regulation of metabolic process regulation of gene expression primary metabolic process translation Negative regulation of histone modification 5 18 > 5 + 4.42E-15 Negative regulation of chromatin modification 15 22 > 5 + 7.15E-11 Nucleosome assembly 65 65 > 5 + 1.95E-26 Female meiosis chromosome segregation 34 32 > 5 + 2.46E-11 Chromatin assembly 73 67 > 5 + 3.20E-25 Negative regulation of chromosome organization 30 27 > 5 + 7.89E-09 Protein-DNA complex assembly 85 76 > 5 + 3.64E-28 Regulation of histone modification 26 23 > 5 + 4.31E-07 Nucleosome organization 80 66 > 5 + 2.62E-22 DNA packaging 122 93 4.68 + 1.04E-29 Protein-DNA complex subunit organization 107 78 4.48 + 2.22E-23 DNA conformation change 134 96 4.4 + 1.08E-28

DNA conformation change 134 96 4.4 + 1.08E-28 Cell cycle DNA replication 23 16 4.27 + 5.53E-03 Meiotic chromosome segregation 65 44 4.16 + 3.08E-11 Female meiotic division 73 47 3.96 + 2.36E-11 DNA-dependent DNA replication 57 35 3.77 + 2.02E-07 Nuclear chromosome segregation 131 79 3.71 + 9.90E-19 Reciprocal meiotic recombination 29 17 3.6 + 2.49E-02 Chromosome condensation 47 27 3.53 + 1.06E-04 Reciprocal DNA recombination 30 17 3.48 + 3.81E-02 DNA replication 80 45 3.46 + 7.84E-09 Chromosome segregation 151 82 3.34 + 8.37E-17 DNA-templated transcription, initiation 76 41 3.31 + 2.43E-07 Mitotic sister chromatid segregation 72 38 3.24 + 2.09E-06 Sister chromatid segregation 79 39 3.03 + 7.74E-06 Chromatin assembly or disassembly 140 69 3.03 + 8.59E-12 Negative regulation of gene expression, epigenetic 56 27 2.96 + 3.01E-03 Chromatin silencing 55 26 2.9 + 6.68E-03 Regulation of chromatin organization 72 34 2.9 + 2.15E-04 Regulation of chromatin modification 68 31 2.8 + 1.63E-03 Negative regulation of organelle organization 75 34 2.79 + 5.43E-04 Negative regulation of protein modification process 83 37 2.74 + 2.43E-04 Centrosome duplication 84 37 2.71 + 3.25E-04 Regulation of chromosome organization 102 44 2.65 + 3.98E-05 Centrosome cycle 98 42 2.63 + 9.96E-05 DNA recombination 61 26 2.62 + 3.94E-02 Meiosis I 73 31 2.61 + 6.80E-03 DNA metabolic process 243 103 2.6 + 3.65E-14 Microtubule organizing center organization 130 54 2.55 + 3.55E-06 Cellular macromolecular complex assembly 234 95 2.49 + 8.64E-12 Meiotic nuclear division 180 73 2.49 + 1.43E-08 Meiotic cell cycle process 186 74 2.44 + 2.44E-08 Meiotic cell cycle 186 74 2.44 + 2.44E-08 Centrosome organization 126 50 2.44 + 5.83E-05 RNA biosynthetic process 177 68 2.36 + 7.01E-07 Nuclear division 354 135 2.34 + 1.90E-15 Nucleic acid-templated transcription 174 66 2.33 + 2.10E-06 Transcription, DNA-templated 174 66 2.33 + 2.10E-06 Chromosome organization 480 182 2.33 + 1.97E-21 Protein complex assembly 280 106 2.33 + 1.85E-11 Negative regulation of cellular component organization 128 48 2.3 + 5.58E-04 Protein complex biogenesis 283 106 2.3 + 3.60E-11 Organelle fission 361 135 2.3 + 9.01E-15 Gene silencing 99 37 2.3 + 1.40E-02 DNA repair 127 46 2.23 + 2.49E-03 Chromatin organization 314 113 2.21 + 6.43E-11 Macromolecular complex assembly 349 124 2.18 + 8.39E-12 Mitotic nuclear division 207 69 2.05 + 1.30E-04 Nucleobase-containing compound biosynthetic process 321 103 1.97 + 5.46E-07

Regulation of mitotic cell cycle 221 70 1.95 + 6.69E-04 Cell cycle process 674 213 1.94 + 3.45E-16 Cell cycle 729 227 1.91 + 1.07E-16 Nucleic acid metabolic process 865 269 1.91 + 2.63E-20 Regulation of cell cycle process 201 62 1.9 + 7.21E-03 Regulation of cell cycle 350 104 1.83 + 2.32E-05 Heterocycle biosynthetic process 393 114 1.78 + 1.62E-05 Aromatic compound biosynthetic process 389 111 1.75 + 5.91E-05 Negative regulation of nucleobase-containing compound metabolic process 309 88 1.75 + 1.81E-03 Regulation of organelle organization 284 80 1.73 + 8.46E-03 Mitotic cell cycle 538 151 1.72 + 5.05E-07 Negative regulation of RNA biosynthetic process 275 77 1.72 + 1.58E-02 Negative regulation of transcription, DNA-templated 275 77 1.72 + 1.58E-02 Negative regulation of nucleic acid-templated transcription 275 77 1.72 + 1.58E-02 Microtubule cytoskeleton organization 405 113 1.71 + 1.37E-04 Negative regulation of gene expression 405 113 1.71 + 1.37E-04 Mitotic cell cycle process 484 135 1.71 + 6.93E-06 Negative regulation of macromolecule biosynthetic process 323 90 1.71 + 3.26E-03 Negative regulation of cellular macromolecule biosynthetic process 323 90 1.71 + 3.26E-03 Cellular response to DNA damage stimulus 274 76 1.7 + 2.48E-02 Negative regulation of cellular biosynthetic process 332 92 1.7 + 3.11E-03 Negative regulation of biosynthetic process 332 92 1.7 + 3.11E-03 Protein complex subunit organization 580 160 1.7 + 4.80E-07 Negative regulation of RNA metabolic process 288 79 1.69 + 2.44E-02 Organic cyclic compound biosynthetic process 431 117 1.67 + 3.20E-04 Negative regulation of nitrogen compound metabolic process 354 96 1.67 + 4.47E-03 Nucleobase-containing compound metabolic process 1149 309 1.65 + 1.39E-14 RNA metabolic process 644 173 1.65 + 6.03E-07 Negative regulation of macromolecule metabolic process 531 141 1.63 + 5.90E-05 Positive regulation of macromolecule biosynthetic process 328 87 1.63 + 3.03E-02 Regulation of cellular macromolecule biosynthetic process 941 246 1.61 + 1.04E-09 Regulation of macromolecule biosynthetic process 943 246 1.6 + 1.29E-09 Macromolecular complex subunit organization 866 224 1.59 + 3.48E-08 Heterocycle metabolic process 1240 320 1.59 + 8.47E-13 Negative regulation of metabolic process 566 146 1.58 + 1.83E-04 Cellular aromatic compound metabolic process 1273 326 1.57 + 1.17E-12 Regulation of biosynthetic process 997 255 1.57 + 3.49E-09 Regulation of cellular biosynthetic process 996 254 1.57 + 5.22E-09 Regulation of RNA biosynthetic process 846 215 1.56 + 4.21E-07 Regulation of transcription, DNA-templated 846 215 1.56 + 4.21E-07 Regulation of nucleic acid-templated transcription 846 215 1.56 + 4.21E-07 Cellular component assembly 752 191 1.56 + 5.04E-06

Regulation of cellular protein metabolic process 429 108 1.55 + 2.59E-02 Organic cyclic compound metabolic process 1343 335 1.53 + 1.41E-11 Regulation of gene expression 1080 268 1.52 + 2.02E-08 Regulation of nucleobase-containing compound metabolic process 974 241 1.52 + 3.43E-07 Regulation of protein metabolic process 454 112 1.52 + 4.16E-02 Negative regulation of cellular metabolic process 485 119 1.51 + 2.88E-02 Regulation of nitrogen compound metabolic process 1079 264 1.5 + 1.20E-07 Positive regulation of macromolecule metabolic process 521 127 1.5 + 1.98E-02 Single-organism organelle organization 1080 263 1.5 + 2.07E-07 Cellular component biogenesis 826 201 1.5 + 4.65E-05 Regulation of cellular component organization 639 155 1.49 + 2.58E-03 Regulation of RNA metabolic process 923 222 1.48 + 1.98E-05 Regulation of macromolecule metabolic process 1423 341 1.47 + 1.33E-09 Macromolecule biosynthetic process 708 169 1.47 + 2.15E-03 Cellular macromolecule biosynthetic process 700 167 1.47 + 2.58E-03 Organelle organization 1539 365 1.46 + 6.42E-10 Regulation of primary metabolic process 1378 322 1.44 + 1.20E-07 Regulation of cellular metabolic process 1421 326 1.41 + 6.69E-07 Negative regulation of biological process 1141 258 1.39 + 2.19E-04 Cellular nitrogen compound metabolic process 1516 342 1.39 + 1.43E-06 Regulation of metabolic process 1620 362 1.37 + 1.18E-06 Negative regulation of cellular process 1011 225 1.37 + 4.82E-03 Cellular component organization 2359 520 1.35 + 3.67E-10 Positive regulation of biological process 1100 242 1.35 + 4.34E-03 Positive regulation of cellular process 969 212 1.34 + 2.84E-02 Nervous system development 1550 337 1.34 + 8.82E-05 Cellular component organization or biogenesis 2420 526 1.34 + 2.57E-09 Organic substance biosynthetic process 1107 239 1.33 + 1.84E-02 Regulation of cellular process 2901 626 1.33 + 2.06E-11 Neurogenesis 1398 299 1.31 + 2.42E-03 Cellular macromolecule metabolic process 2233 477 1.31 + 5.37E-07 Regulation of biological process 3154 673 1.31 + 1.10E-11 Nitrogen compound metabolic process 1782 379 1.31 + 1.07E-04 Biological regulation 3431 720 1.29 + 2.45E-11 System development 2184 457 1.29 + 2.09E-05 Multicellular organismal development 2737 557 1.25 + 1.38E-05 Cell differentiation 2207 446 1.24 + 1.78E-03 Single-organism cellular process 4961 1000 1.24 + 9.04E-14 Cellular developmental process 2276 458 1.24 + 1.90E-03 Anatomical structure development 2973 588 1.22 + 2.56E-04 Cellular process 6231 1227 1.21 + 2.66E-16 Developmental process 3281 645 1.21 + 1.03E-04 Single-organism developmental process 3257 639 1.21 + 1.68E-04 Cellular metabolic process 3189 625 1.2 + 2.97E-04 Macromolecule metabolic process 2815 551 1.2 + 2.89E-03 Single-organism process 6411 1225 1.17 + 2.10E-11 Primary metabolic process 3500 667 1.17 + 4.89E-03 Single-multicellular organism process 3282 625 1.17 + 1.38E-02

Organic substance metabolic process 3812 710 1.14 + 4.27E-02 Unclassified 3044 506 1.02 + 0.00E+00 Translation 290 19 0.4-6.04E-03 Amide biosynthetic process 309 20 0.4-2.22E-03 Peptide biosynthetic process 299 19 0.39-2.40E-03