Portunidae 幷 [1] Genetic diversity. * 2006BAD03B Z M

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Mar. 2010, Volume 4, No.2 (Serial No.27) Journal of Life Sciences, ISSN 1934-7391, USA 200090 幷 1. 幷 [1] [2] [3] [4] Scylla spp. Crustacea Decapoda Brachyura Portunidae 1. Genetic diversity * 2006BAD03B08-09 2007Z01 2008M02 1979 E-mail: kjjiang@hotmail.com. 1972 E-mail: malingbo@vip.sina.com. 45

Molecular marker DNA Genetic marker DNA [5] DNA [6] 3. 9 [7] 1 2 3 4 5 6 7 8 9 Restriction Fragment Length Polymorphism RFLP [8,9] DNA Random Amplified Polymorphic DNA RAPD [10] Amplified Fragment Length Polymorphism AFLP [11] DNA Simple Sequence Repeat SSR [12-14] Inter-Simple Sequence Repeats ISSR [15] DNA Single-Nucleotide Polymorphism SNP [16] DNA Mitochondrial DNA mtdna [17] Expressed sequence Tag, EST [18] Sing1e Strand Conformation Po1ymorphism SSCP DNA DNA Amplification Fingerprinting DAF Denaturing Gradient Gel Electrophoresis DGGE Temperature Gradient Gel Electrophoresis TGGE 4. DNA S. serrata [19] S. serrata, S. oceanic, S. tranquebarica [20] S. serrata, S. tranquebarica, S. paramamosain, S. olivacea [21] DNA 幷 DNA DNA DNA 5 72 72 COI [22] 12 46

COI 98% 9.98% 10.84% 0.00783 0.11659 [23,24] DNA Gopurenko 3 N=21 3 N=76 5 N=28 S. serrata [25] I I II 38 Numts [26] COI [27] 5 [28] 10 [29] 5. 1997 2003 180 5.1 [30] [31,32] [33] 1 [34] 2 3 4 DNA PCR 5.2 47

1 10 25 100 2 100 3 幷 4 5 6 7 8 5.3 DNA [24,35] DNA 16.8% [36] [37] RAPD RAPD 3 [38] DNA [39] [40] 5.4 1 2 3 4 6. 60 11 30 8 90 [41] 15% 48

[42] [43-45] [46-49] 7. 幷 [1]. [J]. 2007 29 4 371-374. [2]. [J]. 2008 8 17-19. [3]. [J]. 2008 30 526-531. [4]. [J]. 2008 30 1585-1591. [5]. [J]. 2008 27 312-315. [6]. [J]. 1996 29 1-10. [7]. [J]. 1999 15 19-22. [8] Botstein, D., White, R. L., Skolnick, M., et al. Construction of a genetic linkage map in man using Restriction Fragment Length Polymorphisms. American Journal of Human Genetics, 1980, 32: 314-331. [9] Grodzicker, T., Anderson, C., Sharp, P. A., et al. Conditional lethal mutants of adenovirus 2-simian virus 40 hybrids I. host range mutants of Ad2+ND1. Journal of Virology, 1974, 13: 1237-1244. [10] Williams, J. G. K., Anne, R., Livak, K. J., et al. DNA polymorphisms amplified by arbitrary primers are useful as genetic makers. Nucleic Acids Research, 1990, 18: 6531-6535. [11] Zabeau, M. and Vos, P.. Selective restriction fragment amplification: A general method for DNA fingerprinting. European Patent Application 92402629.7 (Publication No. 0534858A1) Paris: European Office, 1993. [12] Moore, S. S., Sargeant, L. L., King, T. J. et al. The conservation of dinucleotide microsatellites among mammalian genomes allows the use of heterologous PCR primer pairs in closely related species. Genomics, 1991, 10: 654-660. [13] Rassmann, K., Schlötterer, C. and Tautz, D.. Isolation of simple-sequence loci for use in polymerase chain reaction-based DNA fingerprinting. Electrophoresis, 1991, 12: 113-118. [14] Schlotteröer, C., Amos, B. and Tautz, D.. Conservation of polymorphic simple sequence loci in cetacean species. Nature, 1991, 354: 63-65. [15] Zietkiewicz, E., Rafalski, A. and Labuda, D.. Genome fingerprinting by Simple Sequence Repeat (SSR)-anchored Polymerase Chain Reaction amplification. Genomics, 1994, 20: 176-183. [16] Landegren, U., Nilsson, M. and Kwok, P.-Y. Reading bits of genetic information: methods for Single-Nucleotide Polymorphism Analysis. Genome Research, 1998, 8: 769-776. [17] Hickerson, M. J. and Cunningham, C. W. Dramatic mitochondrial gene rearrangements in the hermit crab Pagurus longicarpus (Crustacea, Anomura). Molecular Biology and Evolution, 2000, 17: 639-644. [18] Adams, M. D., Kelley, J. M., Gocayne, J. D. et al. Complementary DNA sequencing: expressed sequence tags and human genome project. Science, 1991, 252: 1651-1656. 49

[19] Stephenson, W. and Campbell, B.. The Australian portunids (Crustacea: Portunidae) IV. Remaining genera. Australian Journal of Marine and Freshwater Research, 1960, 11: 73-122. [20] Estampador, E. P.. Studies on Scylla (Crustacea: Portunidae) I. Revision of the genus. Philippine Journal of Science, 1949, 78: 95-108. [21] Keenan, C. P., Davie, P. J. F. and Mann, D. L. A revision of the genus Scylla de Haan, 1883 (Crustacea: Decapoda: Brachyuan: Portunidae). The Raffles Bulletin of Zoology, 1998, 46: 217-245 [22] Bateman, A., Coin, L., Durbin, R., et al. The Pfam protein families database. Nucleic Acids Research, 2004, 32: D138-141. [23] Ma, L. B., Zhang, F. Y., Ma, C. Y., et al. Scylla paramamosain (Estampador) the most common mud crab (Genus Scylla) in China: evidence from mtdna. Aquaculture Research, 2006, 37: 1694-1698. [24]. COI [J]. 2006 30 463-468. [25] Gopurenko, D., Hughes, J. M. and Keenan, C. P. Mitochondrial DNA evidence for rapid colonisation of the Indo-West Pacific by the mud crab Scylla serrata. Marine Biology, 1999, 134: 227-233. [26]. COI [J]., 2006 28 43-49. [27] Fratini, S. and Vannini, M. Genetic differentiation in the mud crab Scylla serrata (Decapoda: Portunidae) within the Indian Ocean. Journal of Experimental Marine Biology and Ecology, 2002, 272: 103-116. [28] Masatsugu, T., Anna, B., Takuma, S., et al. Isolation and characterization of microsatellite DNA markers from mangrove crab, Scylla paramamosain. Molecular Ecology Notes, 2005, 5: 794-795. [29] Xu, X. J., Wang, G. Z., Wang, K. J., et al. Isolation and characterization of ten new polymorphic microsatellite loci in the mud crab, Scylla paramamosain. Conservation Genetics, 2009, 10: 1877-1878. [30]. [J]. 1993 24 137-142. [31]. [J]. 2004 26 131-139. [32]. [J]. 2003 25 73-76. [33]. [J]. 2008 1 6-12. [34]. [J]. 2008 32 1 42-46. [35]. DNA [J]. 2009 33 1 15-23. [36] Imai, H., Obata, Y., Sekiya, S., et al. Mitochondrial DNA markers confirm successful stocking of mud crab juveniles, (Scylla paramamosain) into a natural population. Suisan Zoshoku, 2006, 50: 149-156. [37]. [J]. 2008 32 96-101. [38] Klinbunga, S., Boonyapakdee, A. and Pratoomchat, B. Genetic diversity and species-diagnostic markers of mud crabs (Genus Scylla) in eastern Thailand determined by RAPD analysis. Marine Biotechnology, 2000, 2: 180-187. [39] Kitakado, T., Kitada, S., Obata, Y., et al. Simultaneous estimation of mixing rates and genetic drift under successive sampling of genetic markers with application to the mud crab (Scylla paramamosain) in Japan. Genetics, 2006, 173: 2063-2072. [40]. Scylla [J]. 2007 31 211-219. [41]. [J]. 2003 30 1 10-12. [42]. [J]. 2005 27 919-924. [43]. [J]. 2009 30 54-59. [44]. 1 [J]. 2005 29 1-5. [45]. DNA [J]. 2005 29 6-12. [46]. [J]. 2009 22 56-61. [47]. QTL [J]. 2006 27 533-540. [48]. [J]. 2008 15 689-703. [49]. Scophthalmus maximus [J]. 2009 40 577-583. 64 50