HPC realization of a controlled turbulent round jet using OpenFOAM a)
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1 Open Source CFD 2013 HPC realization of a controlled turbulent round jet using OpenFOAM a) Asim Onder 1, b) and Johan Meyers 1 Department of Mechanical Engineering, Katholieke Universiteit Leuven The present paper investigates high performance computing abilities of OpenFOAM for a low Reynolds number (Re D = 2000) axisymmetric jet subject to multiple zero net mass flux (ZNMF) actuators. First, parallel performance of OpenFOAM is tested by performing a scaling study up to 2048 processors on a supercomputer of Flemish Supercomputer Center(VSC). Then, a method to improve the parallel efficiency is proposed. The method is based on developing a hybrid concept to calculate the statistical moments. This new concept combines ensemble and time averaging in order to allow data sampling in parallel. The motivation is obtaining a reduction in the walltime to collect turbulent statistics which is observed to be the dominating part in the ZNMF controlled jet flow. Employing this parallel statistical averaging approach in combination with regular grid partitioning parallelism, allowed us conducting DNS cases on P = 624 processors with an overall speed-up of S e = and a parallel efficiency of E e = The parallelization using only grid partitioning exhibited inferior performance with S e = and E e = In addition to develop a methodology to increase the parallel performance, we reduced the time step cost of the existing unsteady solver as well. To this end, an incremental projection method is implemented into OpenFOAM and a performance gain above 30% is realized. I. INTRODUCTION Controlling turbulent round jet flows is of major interest because of technological relevance. Typical applications are reducing the aircraft noise and improving the mixing efficiency in combustion and exhaust systems. Zero net mass flux (ZNMF) actuation using synthetic jets is one of the popular methods used in this type of applications. 10 In the current work, we investigate ZNMF controlled jets by conducting direct numerical simulation (DNS) using the open source CFD toolbox OpenFOAM. 14 In DNS all the relevant scales of turbulence need to be numerically well resolved. However, ZNMF actuators have a length scale that is an order magnitude lower than that of the main jet. Thus, resolving them on a computational grid designed primarily for the main jet is computational challenge. Considering the second order spatial accuracy of finite volume discretization in OpenFOAM these conditions require an excessive number of grid elements to be employed. Hence, the scalability of the solver becomes very important. In the present research effort, we performed a set DNS simulations of controlled round jets on a supercomputer of the Flemish Supercomputer Center (VSC). The main focus of the study is on the development of methodologies that will allow us to realize these numerical experiments within a feasible time framework. The considered Reynolds number is low compared to the Reynolds numbers to be found in practical applications. Nevertheless, certain aspects of the low Reynolds number jet are also inherited by high Reynolds number jets. In order to realize a large scale turbulent flow simulation on a supercomputer, first we use a method that improves the efficiency of parallelism by means of an optimal combination of ensemble averaging and grid partitioning based on the idea of Carati et al. 1 and further a) OpenFOAM is a trademark of OpenCFD Ltd (ESI Group) b) Electronic mail: [email protected]
2 Open Source CFD elaboration in Onder et al. 8. Using this approach, we are able to conduct DNS cases each using 624 processors. Another parameter to be improved was the time step cost of the unsteady solver in OpenFOAM. To this end, we implemented an incremental projection scheme 13 to replace the costly iterative algorithm in OpenFOAM s PisoFOAM. The coupled system of momentum and continuity equations are segregated with this non-iterative scheme without losing the second order accuracy of time integration. The paper is organized as follows: In Sec. II we introduced the flow problem and related computational details. Then, in Sec. III the implemented projection algorithm is presented. Furthermore, the parallel statistical averaging method to improve the parallel efficiency is discussed in Sec. IV. Some DNS results are presented in Sec. V. Finally, the conclusions are given in Sec. VI. II. NUMERICAL SETUP This section is devoted to the description of the details for conducted numerical experiments. First, we will define the flow problem and then the computational details will follow. A. Flow configurations We consider a jet discharged into the free motionless ambient fluid through an axisymmetric orifice with a diameter D. The orifice is surrounded by solid walls. The jet at the orifice contains the full concentration of a scalar quantity which will be used in our mixing analysis. The governing equations are the incompressible Navier-Stokes equations u i t + u iu j and a passive scalar transport equation: = p + 1 Re D 2 u i x j x j, (1) u i = 0, (2) c t + u ic = 1 2 c, (3) Re D Sc x j x j where u i are the fluid velocity components, c is the passive scalar, Re D denotes the Reynolds number based on the orifice diameter and jet orifice velocity U J and Sc denotes the Schmidt number. All the cases considered in this work have a Reynolds number of Re D = 2000 and a Schmidt number of unity Sc = 1.0. Numerical experiments are carried out using DNS approach where the intention is resolving all the scales of the turbulent flow. We specified a uniform velocity U J in the core region and and laminar Blasius profile in the vicinity of the wall as used by a previous numerical work 7. In order to control the main jet we employ three actuators distributed evenly in circumferential direction and placed 0.625D away from the jet centreline (cf. Figure 1 for an outline). The actuation is designed as a boundary condition on the wall and implemented as harmonic oscillations u a = U a sin(2.0πf a t) = U a sin(2.0πst D U J D 1 t). (4) The actuation surface is an elliptic surface to resemble a real synthetic jet mounted in an inclined wall. This elliptic surface is the projection of the real experimental actuation plane making an angle of α = 30 with the jet centreline and it allows the same mass flux. Individual actuators have a momentum coefficient of C µ = and a unity actuation
3 Open Source CFD (a) FIG. 1: Configuration of the actuators. TABLE I: Nomenclature and control parameters of investigated cases. (St D ):actuation frequency, (u J /U J):background turbulence level, (C µ ):momentum coefficient for individual actuators Cases Base1 Base2 Con0.5 Con1 Con2 Con4 St D u J/U J C µ velocity to main jet velocity ratio U a /U j = 1. All the controls are in phase to manipulate the axisymmetric mode m = 0 of the main jet. The cases considered in this work are illustrated in Table I. We have designed two reference cases being subject to relatively high perturbations on the main jet inlet flow that consist of white noise. To this end, we introduce temporally correlated noise with random spatial distribution as background disturbance on the inlet velocity while all the actuators are switched off. In the case Base1 we have observed a peak in the velocity spectra at a Strouhal number of St D = St pm = We assumed that this value is the preferred mode of the baseline jet and based on this value we selected four different control frequencies with St D = 0.165, St D = 0.33, St D = 0.66 and St D = In the controlled cases the perturbation level on the baseline jet is reduced to u J = U J. B. Computational details The open-source C++ library OpenFOAM v2.1.x 14 is employed in this study. A cylindrical computational domain is selected which extends L = 16D in axial direction and R = 8D in radial direction. A multiblock-structured grid using hexahedral elements with a square-shaped central block and O-grid building surrounding blocks is designed for calculations. The grid resolution is fixed to 130(x) 130(y) 475(z) elements for the core region and 470(r) 520(θ) 475(z) elements for the O-grid region, which makes in total around elements. In order to represent accurately the synthetic jet main jet interaction, a relatively higher circumferential resolution is used compared to the uncontrolled turbulent round jet simulations. Close to the jet exit, the grid elements are clustered in the jet core region and in the shear layer. This cluster region expands radially moving downstream to resolve the jet spreading effectively. In the streamwise direction the refinements are applied towards the wall in order to resolve the oscillatory actuation dynamics.
4 Open Source CFD Boundary conditions ui ui r = 0 and x = 0 correspond to lateral and outflow boundaries respectively. No inflow is allowed on the outflow boundary. In the framework of discretization the effect of actuation is projected on DNS grid using a Gaussian filter. In OpenFOAM, the equations are discretized in space using a collocated finite volume method where all the variables are stored at the centroids of the grid elements. In the conducted simulations, the face values for the calculation of convective and diffusive terms are approximated using linear interpolation. The flux velocities on faces are modified using Rhie-Chow interpolation to prevent velocity-pressure decoupling. The nonlinear convective term is linearized by employing a second order extrapolation in time for the velocity flux. Temporal discretization and the projection method are discussed in the next chapter. The time step size is fixed to δt = 0.004DU 1 J which enables us to resolve one period of actuation in the highest frequency case, i.e. Con4, with 200 time steps. The initialization of simulations take T i = 16DU 1 J. Afterwards we collect the statistics for a time interval of T s = 320DU 1 J. For case Con1, the initial transient T i corresponds to 20 cycles of actuation and sampling time T s spans 400 cycles. III. THE INCREMENTAL PROJECTION METHOD The original projection methods by Chorin 2,3 and Temam 11,12 were developed as time marching techniques for evolutionary incompressible fluid problems. The name of the projection methods comes from the idea of projecting a vector field onto a subspace of solenoidal vector fields. The classical projection algorithms may be classified according to the pressure extrapolation they employ in the subproblems. According to this classification the two main classes are: the non-incremental projection method, and the incremental projection method. The former uses simply no pressure gradient (zero-order approximation) in the momentum equation (sometimes called Burgers) step. In contrast, the latter method employs a first order pressure extrapolation by using the pressure from the previous time step as the approximated pressure and corrects it in the final step by incrementing with the pressure-correction term obtained in the projection step. This class has been found more attractive due to increase in the accuracy without any extra computational demand compared to the nonincremental one. The incremental method was first used by Goda 5. Then, Van Kan 13 proposed a second-order accurate scheme which combines the incremental algorithm with semi-implicit Crank-Nicolson time discretization. Van Kan s scheme is the method of choice in this work to replace the costly iterative PISO algorithm in OpenFOAM. In order to ease the description we will present the algorithm in spatially continuous framework. Using a Crank-Nicolson scheme with a semi-implicit convective term for the time integration, the basic steps of the incremental projection scheme read as follows: 1. Momentum step: Given u n i and p n from previous time step, solve for ũ n+1 i from ũ i n+1 u n i δt ( un j 1 ) n+1/2 ũi 2 un 1 j 1 x j 2 n+1/2 ũ i Re D x j x j = pn (5) where ũ i n+1/2 = 1 2 (ũi n+1 + u n ) i. 2. Projection step: Perform the projection by solving first 2 ( p n+1 p n) = 1 n+1 ũ i (6) δt
5 Open Source CFD then, updating the velocity u n+1 i = ũ i n+1 δt ( p n+1 p n). (7) The coupled system of momentum and continuity equations are segregated with this scheme. The segregation yields an additional second order error in time. In contrast to OpenFOAM s pisof oam solver which has only a first order approximation to the nonlinear convection velocity (Rhie-Chow corrected convective flux in discretized form) we empoyed a second order approximation in time by using two previous time steps. Combining this linearization method with the Crank-Nicolson time discretization yields a second order temporal accuracy overall. Hence, the order of accuracy of the segregation is consistent with the time marching scheme. Following the projection scheme, each time step a linear system of convection diffusion like equations for each velocity component have to be solved. This is done by using the biconjugate gradient iterative solver with a diagonal incomplete LU preconditioner up to a solution tolerance of The second and more expensive step of the projection scheme requires solving a discretized Poisson equation for the pressure. As the computational grid contains some regions with slightly non-orthogonal elements we employ two extra iterations to reduce the non orthogonality effect. In total, we solve the Poisson iteration three times, using a conjugate gradient solver with a geometric-algebraic multigrid preconditioner up to a tolerance of in the final step. We benchmarked the new projection solver with the existing Piso solver in OpenFOAM. For these tests, we employed 128 processors using grid partitioning paralelism with scotch method on the T ier1 supercomputer of Flemish Supercomputer Center (VSC). T ier1 of VSC has a total number of 8448 computer cores equipped with Intel Sandy Bridge microprocessor technology and FDR Infiniband Mellanox communication network. For the benchmark case, we specified two iterations for Piso solver. Both solvers also included the solution of the passive scalar equation at the end of each time step as well. As a result, projection solver delivered a time step cost of 49.1 s and piso solver covered a time step in 71.5 s. According to these results, the performance gain with the projection solver was over 30%. IV. PARALLEL STATISTICAL AVERAGING In this section we discuss the method we employed to improve the scalability of Open- FOAM in turbulent flow simulations. In direct numerical simulations of turbulent flows, the chaotic and strongly fluctuating velocity fields (in space and time) associated to turbulence, are directly represented in the simulations. For practical purposes, these three-dimensional time-varying velocity fields need to be averaged, yielding mean-velocity profiles, Reynolds stresses, and similar turbulent-flow quantities. Formally, averaging in turbulence is defined using the average over an ensemble of statistical independent realizations of the same flow. For turbulent flow systems that are statistically stationary, this ensemble average is in practice replaced by averaging the solution in time. To this end, simulations are first run for some period of time T i in which the flow starts from an initial condition (usually constructed for some part using random velocities), and subsequently settles into a statistical equilibrium. Afterwards, averaging in time is performed over a period of time T s which needs to be sufficiently long to acquire statistically converged mean-flow quantities. In order to be able to parallelize the averaging of the turbulent solution in LES or DNS of statistically stationary flows, we propose to partially resort back to the definition of an ensemble average, i.e. we propose to build a set of R statistical independent realizations of the same flow, that can be simulated independently (in parallel), with an interval for time
6 Open Source CFD TABLE II: Parallel performance of OpenFOAM for Con1 case. Linear speed-up is assumed for p = 64 case. p time step cost(s) S g(p) E g(p) = S g(p)/p Se P = pr (a) speed-up Ee P = pr (b) parallel efficiency FIG. 2: Parallel performance for two cases. ( ) : S e (p, 1) = S g (p) (only grid partitioning) ; ( ) : S e (p = 128, R = 1 16). averaging that is now reduced to T s /R. This averaging operation reads as follows: u(x) 1 R R R T r=1 S t0+t S /R t 0 u {r} (x, t) dt, (8) This idea is fairly simple, and was, e.g. already proposed in a slightly different context by Carati et al 1. The major drawback for the current case is that all R simulations need to be initialized, and require a start-up run during which the initial velocity field evolves into statistical equilibrium. The required time T i is typically of the order of a few throughflow times of the simulation domain; a more precise discussion is provided in Onder et al. 8. Taking this non-parallelizible initialization time T i into account in the proposed parallelization of ensemble averaging, we end up with a parallel speed-up, and parallel efficiency respectively of S e (p, R) = Tw 1 T w P E e (p, R) = Tc 1 T c P = T i + T s T i + T s /R S g(p) = R k + 1 Rk + 1 S g(p) (9) = S e(p, R) pr, (10) with k = T i /T s, S g (p) is the speed-up due to grid partitioning and where we introduce T w, and T c respectively as the wall-time, and the cpu-time of computations. It is appreciated that the efficiency of the proposed parallelization becomes very poor for Rk 1. Moreover, unless k 1, the potential for speed-up is rather limited. Given T i = 16DU 1 J and T s = 320DU 1 J (cf. Sec. II), we have k = 0.05 for our DNS cases. This low value of k allowed us to efficiently employ parallel statistical averaging in our studies. In order to find the right balance between p and R we conducted a scaling study covering 1000 time steps of case Con1. The results are reported in Table II. Using these results, we first explored the potential of parallel statistical averaging by investigating an experimental case with p = 128 and R = The comparison of the speed-up and efficiency of this
7 Open Source CFD x/d=10-5/ x/d= x/d= x/d=4 x/d=2 (a) Base (b) Base (c) Con (d) Con (e) Con (f) Con4 FIG. 3: Power spectra of centreline velocity signals with normalized frequency axis using the preferred mode value St pm = Each spectrum is shifted one decade starting from the signals on x/d = 10 case with the ones of regular grid partitioning is illustrated in Fig. 2. We can clearly see in these figures that the addition of ensemble averaging concept on top of grid partitioning parallelism improves the parallel performance. According to the data, we see that up to p = 156 processors the code exhibit linear speedup. Therefore, for this study we selected a configuration of p = 156 and R = 4 for our DNS studies. This configuration delivers an overall speed-up of S e = and E e = 0.87 on P = 624 processors, where S g (624) = and E g (624) = 0.68 only. The improved parallelism with parallel statistical averaging is clear. Moreover, we have to note that a potential for further improvement exists if number of branches R is increased. As mentioned before, we designed six different test cases (cf. Table I) and ran them simultaneously making a total number of 3744 processors. Hence, we limited R to 4 in each case and didn t exploit the full potential of parallel statistical averaging. V. DNS RESULTS In this section we present some results from DNS experiments. First, we have calculated the power spectra of streamwise component of fluctuating velocity signals at particular
8 Open Source CFD a b c d FIG. 4: Visualization of vortical structures by isosurfaces of Q criterion. Coloring by velocity magnitude for cases (a) Con0.5; (b) Con1; (c) Con2; (d) Con4; (left) streamwise view in non-actuation plane; (right) transverse view in x = 0 locations on the jet axis (r/d = 0). The results are reported in Fig. 3. The dotted lines in these figures correspond to 5/3 slope of the Kolmogorov spectrum in the inertial region and the dashed lines correspond to 7 slope of the Pao spectrum characterizing the dissipation range9. The difference in the controlled cases compared to the unactuated cases is the display of distinctive peaks corresponding to actuation frequencies and their subharmonics. These peaks represent the enhancement of coherent motion under the effect of the actuation. For cases Con0.5 and Con1 spectral peaks due to actuation diminish very slowly when moving downstream. Even at x/d = 10 they are evident. In contrast,
9 Open Source CFD ṁ/ m x/d (a) entrainment 1/Cc x/d (b) decay rate of passive scalar FIG. 5: The variation of entrainment and passive scalar decay rate with axial distance. (- - ): Base1; (- - ): Base2 ; ( ): Con0.5; ( ): Con1; ( ): Con2; ( ): Con4. spectra of Con2 and Con4 at x/d = 10 is very similar to the ones observed in baseline cases and demonstrate no distinctive peaks on wide-scale turbulence spectra. Moreover, another obvious distinction in these high frequency control cases is the additional peaks at half values of the actuation frequencies which are the result of vortex pairings events. We illustrated next the resulting vortical structures in Fig. 4 using Q criterion. 6. The evolution of the vortical structures strongly depends on the control frequency. Close to the orifice the shed frequency of the Kelvin-Helmholtz vortex rings are locked to the actuation frequency. As in the Con1 case the actuation is in a frequency regime which is the closest to the natural jet instability frequencies 4, the most enhanced coherence and large scale structure development take place. For actuation with the highest frequency considered in this work, i.e. Con4, there is a lot less coherent structure growth compared to the other cases. In Fig. 5a the results for entrainment of the ambient fluid is plotted. Entrainment is a commonly used parameter in mixing studies as the first stage of mixing is entraining the surrounding ambient fluid into the turbulent jet core. We observe that the entrainment is enhanced significantly by actuated cases Con0.5, Con1 and Con2. Con1 case delivers again superior results compared to other controlled cases. The decay of passive scalar concentration on the jet centreline is a more direct indicator of mixing efficiency. In Fig. 5b the development of the reciprocal of centreline scalar concentration C c = c r=0 is shown for all cases. Here we see directly that actuation in preferred mode is very effective in terms of mixing efficiency. VI. CONCLUDING REMARKS In this work we tested and improved the high performance computing capabilities of OpenFOAM for a low Reynolds number (Re D = 2000) axisymmetric jet subject to multiple ZNMF actuators. Our motivation was first increasing the limited scalability of OpenFOAM by using parallel statistical averaging in combination with grid partitioning parallelism. This approach allowed us conducting DNS cases on P = 624 processors with an overall speed-up of S e = and and parallel efficiency of E e = It is shown that the parallelization using only grid partitioning delivered inferior performance with S e = and E e = 0.68 for P = 624. We also showed that in this configuration a potential for further improvement exists if the number of members in the ensemble is increased. Additionally, we aimed to reduce the time step cost of the existing unsteady solver. Hence, an incremental projection method is implemented and a performance gain above 30% is achieved.
10 Open Source CFD REFERENCES 1 D. Carati, M. Rogers, and A. Wray. Statistical ensemble of large-eddy simulations. Journal of Fluid Mechanics, 455: , MAR A. J. Chorin. Numerical solution of the Navier-Stokes equations. Mathematics of computation, 22(104): , A. J. Chorin. On the convergence of discrete approximations to the Navier-Stokes equations. Mathematics of Computation, 23(106): , S. C. Crow and F. H. Champagne. Orderly structure in jet turbulence. Journal of Fluid Mechanics, 48: , K. Goda. A multistep technique with implicit difference schemes for calculating two-or three-dimensional cavity flows. Journal of Computational Physics, 30(1):76 95, J. C. Hunt, A. Wray, and P. Moin. Eddies, streams, and convergence zones in turbulent flows. In Studying Turbulence Using Numerical Simulation Databases, 2, volume 1, pages , J. Kim and H. Choi. Large eddy simulation of a circular jet: effect of inflow conditions on the near field. Journal of Fluid Mechanics, 620: , A. Onder, P. Wu, and J. Meyers. Improving speed-up and efficiency in simulation of stationary turbulent flows by parallelization of statistical averaging. In Proceedings of the 9th International ERCOFTAC Symposium on Engineering Turbulence Modeling and Measurements (ETMM9), June S. Pope. Turbulent flows. Cambridge University Press, D. A. Tamburello and M. Amitay. Active control of a free jet using a synthetic jet. International Journal of Heat and Fluid Flow, 29(4): , R. Temam. Une méthode d approximation de la solution des équations de Navier-Stokes. Bulletin de la Société Mathématique de France, 96: , R. Temam. On the approximation of the solution of e Navier-Stokes equations by m é method of fractional steps (i). Archive for Rational Mechanics and Analysis, 32(2): , J. van Kan. A second-order accurate pressure correction scheme for viscous incompressible flow. SIAM J. Sci. Stat. Comput., 7(3): , July H. G. Weller, G. Tabor, H. Jasak, and C. Fureby. A tensorial approach to computational continuum mechanics using object-oriented techniques. Comput. Phys., 12: , November 1998.
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