International Journal of Food Microbiology

Size: px
Start display at page:

Download "International Journal of Food Microbiology"

Transcription

1 International Journal of Food Microbiology 126 (2008) Contents lists available at ScienceDirect International Journal of Food Microbiology journal homepage: Effect of microbial biocontrol agents on alleviating oxidative damage of peach fruit subjected to fungal pathogen Xiangbin Xu a,b, Guozheng Qin a, Shiping Tian a, a Key Laboratory of Photosynthesis and Environmental Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing , China b Graduate School of the Chinese Academy of Sciences, Beijing , China ARTICLE INFO ABSTRACT Article history: Received 16 August 2007 Received in revised form 8 May 2008 Accepted 14 May 2008 Keywords: Antagonistic yeast Postharvest diseases Peach fruits Antioxidant defense Protein carbonylation Biocontrol Levels of protein carbonylation in peach fruits inoculated with four antagonistic yeasts (Pichia membranaefaciens, Cryptococcus laurentii, Candida guilliermondii and Rhodotorula glutinis) were significantly reduced in response to reactive oxygen species (ROS) caused by Monilinia fructicola. In control fruit without yeast treatments, proteins carbonylation obviously increased after inoculation with M. fructicola, ranging from molecular mass 20 to 120 kda. However, in yeast-treated fruits, no proteins carbonylation was detected at 1 d, only a small quantity of carbonylation ranging from 28.5 to 45 kda was found at 2 d. Antagonistic yeasts significantly stimulated the activities of chitinase, β-1,3-glucanase, catalase (CAT), peroxidase (POD) and the expressions of relevant genes during all storage periods. These results suggest that yeast treatments may be related to alleviating proteins carbonylation and mitigating pathogen-induced oxidative damage, which result in decrease of fruit decay and imply that antioxidant defense response may be involved in the mechanisms of microbial biocontrol agents against fungal pathogen Elsevier B.V. All rights reserved. 1. Introduction Plants have evolved elaborate defense mechanisms to protect themselves against attack by pathogens such as fungi, bacteria and viruses. One of the most prominent and earliest defense responses is the generation of reactive oxygen species (ROS) (Doke, 1983; Mittler, 2002), such as hydrogen peroxide (H 2 O 2 ), superoxide anion (O 2 )andhydroxyl radical (OH )(Campo et al., 2004), which can trigger hypersensitive cell death, leading to phytoalexin synthesis, lignification, and pathogenesisrelated (PR) protein gene expression (Sutherland, 1991; VanLoon, 1997; Pothika et al., 1999). This defense response is called hypersensitive response (HR) and is considered to be a major element of plant disease resistance. When produced in a rapid and controlled manner, ROS are cellular requirement, because they are involved in signalling pathways and in the defence defense against stress (Levine et al., 1994a; Lamb and Dixon,1997; Foyer and Noctor, 2000). On the contrary, ROS may also be a source of oxidative stress when plant encounters ionic toxicity, osmotic stress, drought (Cavalcanti et al., 2004) and compatible plant pathogen interactions (Gayoso et al., 2004; Kwon and Anderson, 2001; Levine et al., 1994b). Uncontrolled overproduction of ROS can seriously disrupt normal metabolism by oxidizing nucleic acids, proteins, lipids, or carbohydrates, affecting the integrity of cell membranes and inactivating key cellular functions (Halliwell and Gutteridge, 1999). Therefore, Corresponding author. Tel.: ; fax: address: tsp@ibcas.ac.cn (S. Tian). antioxidant strategies are compulsory for maintenance of cell redox homeostasis. Several studies have shown that signal molecules such as salicylic acid (Borsani et al., 2001), methyl jasmonic acid (Jung, 2004) and nitric oxide (Beligni et al., 2002) play important roles in provoking plant resistance to various biotic or abiotic stresses. Plant growthpromoting rhizobacteria (PGPR) also showed the capability in activating antioxidants including superoxide dismutase (SOD) and peroxidase (POD), which are associated with PGPR-mediated induced systemic resistance (ISR) and providing protection against diverse pathogens (Silva et al., 2004; Jetiyanon, 2007). In recent years, a number of microbial biocontrol agents were reported to be effective in inhibiting postharvest decay of fruits (Ippolito et al., 2000; Janisiewicz and Korsten, 2002). The mechanisms of antagonists against fungal pathogens include secretion of antibiotics, competition for space and nutrients, production of lytic enzymes, and induction of host resistance (Wisniewski et al., 1991; Chan and Tian, 2005). In particular, induced resistance (IR) is recognized as an important mode of biocontrol in vegetative tissues (Sequeira, 1983). In our previous studies, Pichia membranaefaciens and Candida guilliermondii were found to be effective in inducing activities of chitinase and β-1,3-glucanase in nectarine (Fan and Tian, 2000) and peach fruit(fan et al., 2000). Cryptococcus laurentii was proved to induce the activity of β-1,3-glucanase and expression of Glu-1 gene in jujube fruit, resulting in the decrease of decay caused by Alternaria alternata (Tian et al., 2006) and Penicillium expansum (Tian et al., 2007). However, up to now, most studies of yeast-mediated decay control focused on the induction of defense-related enzyme against fungal pathogens. Little evidence has been demonstrated for antioxidant proteins in plants induced by yeast against pathogen-induced oxidative stress, especially in /$ see front matter 2008 Elsevier B.V. All rights reserved. doi: /j.ijfoodmicro

2 154 X. Xu et al. / International Journal of Food Microbiology 126 (2008) postharvest disease control. Recently, our study showed that yeast P. membranaefaciens obviously induced 5 antioxidant and 3 PR proteins in peach fruit based on proteomic approach (Chan et al., 2007). Therefore, we hypothesized that the increased antioxidant enzymes induced by antagonistic yeast may act as a scavenger to reduce the pathogen-induced oxidative stress. Immunodetection of carbonylated proteins is a good indicator of protein damage due to oxidative stress and has been widely used in studies on human diseases, such as Alzheimer's disease, chronic lung disease, chronic renal failure, diabetes and sepsis (Conrad et al., 2000; Isabella et al., 2003). As an effective strategy for oxidative damage analysis, the identification of carbonylated proteins could act as diagnostic biomarkers and yield basic information to aid the establishment of efficacious antioxidant therapy (Conrad et al., 2000). In postharvest disease control, it may be a potential method for studying the effects of antagonists on pathogen-induced oxidative stress. Therefore, the objective of this study was mainly to investigate the effect of proteins carbonylation in defense response of peach fruits treated by four antagonistic yeasts, P. membranaefaciens, C. laurentii, C. guilliermondii and Rhodotorula glutinis, to determine whether these yeasts were functional in alleviating the pathogen-generated oxidative stress, and to further elucidate the mechanisms by which antagonistic yeast effectively control diseases of fruit. 2. Materials and methods 2.1. Plant material Peach (Prunus persica L. Batsch) fruits were harvested at commercial maturity from an orchard in the Haidian district, Beijing and were transported to laboratory immediately where they were sorted based on size without physical injuries or infections. Selected fruits were surface-disinfected with 2% (v/v) sodium hypochlorite for 2 min, washed with tap water, and air-dried prior to use Antagonists and pathogen Antagonistic yeasts, R. glutinis and C. laurentii were isolated from the surface of apple fruit, and P. membranaefaciens was isolated from the surface of peach fruit in our previous experiments (Fan and Tian, 2000; Tian et al., 2004). The three yeasts were identified by the International Centre for Agriculture and Bioscience (CABI) Bioscience Identification Services (International Mycological Institute, UK). C. guilliermondii was obtained from the Institute of Microbiology, the Chinese Academy of Sciences, Beijing. All yeasts were cultured in nutrient yeast dextrose broth (NYDB) at 28 C for 48 h, and then adjusted to a concentration of cells ml 1 with a hemocytometer. Monilinia fructicola was isolated from decaying peach fruit and cultured on potato dextrose agar (PDA) at 25 C for 7 d. Spores of the fungal pathogen were obtained by flooding the cultures with sterile distilled water containing 0.05% (v/v) Tween-80, then filtered through four layers of sterilized cheesecloth, and adjusted the suspensions to a concentration of pores ml 1 with a hemocytometer Biocontrol assay Peach fruits were wounded at the equator of each fruit with a sterile nail. Wounds were inoculated with 20 μl of cell suspension of each yeast at cells ml 1 or sterile distilled water (as the control). After 12 h, all wounds were challenge-inoculated with 20 μl of conidial suspension of M. fructicola at spores ml 1, respectively. All fruits were put in plastic trays to maintain a relative high humidity (about 95%), and stored at 20 C. Disease incidence and lesion diameter were measured 3 d after treatments. Each treatment contained three replicates of 15 fruits and the entire experiment was performed twice Preparation of total proteins and SDS-PAGE Extraction of total proteins was performed according to the method of Chan et al. (2007). SDS-PAGE was carried out on minigels (15% resolving gels, 5% stacking gel) according to Laemmli (Laemmli, 1970). Thirty microgram of protein was loaded on each lane, and a molecular weight marker solution was loaded at either end of the gel. Electrophoresis was performed at 120 V per gel. Protein content was measured according to the method of Bradford (1976), using bovine serum albumin (BSA) as the standard protein Proteins carbonyl determination The content of carbonylated proteins of peach fruit was detected using the chemical and immunological reagents of the OxyBlot Protein Oxidation Detection kit (Chemicon International, Temecula, CA, USA) (Qin et al., 2007). Briefly, protein sample (30 μg) was mixed with 12% sodium dodecyl sulphate (SDS) (5 μl). 10 mmol/l 2,4- dinitrophenylhydrazine (DNPH) (10 μl) dissolved in 10% trifluoroacetic acid (v/v) was added to the sample. The reaction mixture was vortexed and incubated for 15 min at room temperature. The solution was neutralized by addition of 2 mol/l Tris (10 μl) and centrifuged for 5 min at 2500 g. Proteins were separated by 15% SDS-PAGE and transferred to Immobilon-P polyvinylidene diflouride membrane (Millipore, Bedford, MA, USA) using an electroblotting apparatus (Bio-Rad, Hercules, CA, USA). The oxidatively modified proteins were detected with anti-dnp antibodies and the chemiluminescence blotting substrate SuperECL plus (Applygen Technologies Inc., Beijing, China) Enzyme assays CAT activity was assayed spectrophotometrically at 240 nm in a Shimadzu UV-160 spectrophotometer (Shimadzu Corporation, Kyoto, Japan) (Wang et al., 2004). Activities of POD and β-1,3-glucanase were determined following the method described by Yao and Tian (2005). Chitinase was measured according to the method of Wirth and Wolf (1990). Protein content was measured according to the method of Bradford (1976), using BSA as the standard protein cdna cloning Total RNA was extracted from peach fruit 24 h after treated with yeasts. First-strand cdna was synthesized with first-strand cdna synthesis kit and used for polymerase chain reaction (PCR). The highly conserved domains of peach catalase (CAT), peroxidase (POD), chitinase (CHI) and β-1, 3-glucanase (GLU) cdna clones were obtained by PCR. All primers used were listed in Table 1. The PCR products were cloned into pgem-t vector and sequenced. Table 1 Primers used in the cloning conserved domains of CAT, POD, CHI and GLU cdna in peach fruit cdna amplified Forward primer Reverse primer Temp. C Genebank accession Catalase atggatccttacaagcaccgc tcaaatgcttggcctcacatt 55 AJ496418, AJ Proxidase cggtttggtgtactttgcgatcg tcatttattcatacagagctggc 60 DW353011, DW350829, DW Chitinase aaaaccctggatcttattgtgc accttagcgttccagcccttac 55 AF β-1, 3-glucanase gtatgtaatggaatggttggcg tctcaagagcagcataaacacc 60 AF435088, AF435089, U49454

3 X. Xu et al. / International Journal of Food Microbiology 126 (2008) Isolation of total RNA and northern blot analysis About 10 g frozen flesh tissue (about 2 mm away from the infection site or wound) from 15 fruits was ground in liquid nitrogen. Total RNA was extracted by the method hot-phenol isolation protocol (Chan et al., 2007) and stored at 80 С. RNA (20 μg) was denatured in formamide and formaldehyde at 65 С and electrophoresised in a 1% agarose gel containing formaldehyde (6%, v/v). After electrophoresis, RNA was capillary transferred overnight onto a Hybond-N + membrane (Amersham International, Amersham, Bucks, UK) and hybridized with [ 32 P] dctp-labelled cdna probe. Pre-hybridization and hybridization were carried out at 65 С. Blots were hybridized for 16 h and then washed once for 20 min in 2 SSC, 0.1% SDS at 65 С and twice for 10 min in 0.1 SSC, 0.1% SDS at 65 С. RNA bands were visualized by autoradiography. Equal loading of samples of total RNA was identified by visualization of rrna that had been stained with ethidium bromide. Autoradiographs were digitally scanned and band densities quantified using Scion Image Software (Scion Corporation, Frederick, MD, USA). The 100% was assigned to the maximum optical density value achieved in each northern and the rest were normalized to the maximum value and expressed as percentage of relative intensity Data analysis All data were analysed analyzed by one-way analysis of variance (ANOVA). Mean separations were performed by Duncan's multiple range test. Differences at P 0.05 were considered as significant. 3. Results 3.1. Biocontrol agents reduce brown rot in peach fruits Decayed peach fruits first showed watery spots, and then the typical symptom of brown rot developed gradually from the inoculation site (Fig. 1A). All yeasts significantly reduced disease incidence and limited lesion diameter of brown rot caused by M. fructicola. At 3 d of storage in 20 C, all control fruits decayed, but P. membranaefaciens-, C. laurentii-, C. guilliermondii- and R. glutinistreated fruits had a decay incidence of 70 80%, 60 69%, 6 9% and 81 90%, respectively (Fig. 1B) Biocontrol agents alleviate proteins carbonylation The assessment of oxidative damage of carbonylated proteins in peach fruits was undertaken by immunoassay with anti-dnp antibodies. It was clear that proteins carbonylation occurred in control fruits at 1 and 2 d after inoculation with M. fructicola, ranging in size of apparent molecular masses from about 20 to 120 kda. However, in P. membranaefaciens-, C. laurentii- and R. glutinis-treated fruits, no proteins carbonylation were detected at 1 d. Only a small quantity of carbonylation was observed at 2 d, ranging from 28.5 to 45 kda. Moreover, proteins carbonylation did not occur in C. guilliermondiitreated fruit at 1 and 2 d (Fig. 3B). After 3 and 4 d of inoculation with M. fructicola, although carbonylated proteins were found in all fruits (Fig. 3D), but the levels in yeast-treated fruits were significantly lower compared to the control Biocontrol agents stimulate activities of antioxidant and hydrolytic enzymes CAT activities in the control fruit gradually decreased with prolonging storage time, and remained at lower level throughout the whole storage period (Fig. 3). CAT activities in yeast-treated fruits reached the highest level at 1 d after inoculation with M. fructicola, and were higher than that in the control. POD activities were stimulated by yeast treatments, and showed higher levels compared to the control particularly at the beginning of storage. In addition, the activities of chitinase and β-1,3-glucanase were significantly increased and showed higher levels in yeast-treated fruits than that in the control fruit during the storage time (Fig. 5) Biocontrol agents induce expression of relevant resistant genes In this experiment, catalase, peroxidase, chitinase and β-1,3- glucanase genes were cloned from peach fruit by RT-PCR, and designated as CAT, POD, CHI and GLU. Expression of CAT, POD, CHI Fig. 1. Development of brown rot in peach fruit after treatment with different yeasts. (A) Symptoms of brown rot in peach fruit 3 d after inoculation; (B) Disease incidence and lesion diameter of brown rot in peach fruit. Bars represent standard deviations of the means. Treatments with different letters are significantly different (P 0.05) according to the least significant difference test.

4 156 X. Xu et al. / International Journal of Food Microbiology 126 (2008) and GLU genes in peach fruit was analyzed using northern blotting. There was a significant difference in the level of CAT transcripts between yeast treatments and control (Fig. 4). The transcripts of CAT in the control fruit decreased and remained a lower level throughout the whole storage period. In yeast-treated fruits, the expression of CAT transcripts obviously increased at 1 d, and then decreased with prolonging storage time. However, the expression of CAT transcripts in yeast-treated fruits was significantly higher than that in the control, especially in the P. membranaefaciens-treated fruit. The expression of POD gene transiently increased at the first day of storage, then gradually decreased (Fig. 4). POD transcripts were significantly higher in yeast-treated fruits compared to the control, especially in P. membranaefaciens- and C. laurentii-treated fruits. In yeast-treated fruits, the expression of CHI gene was significantly increased 2 d after inoculation with M. fructicola, especially in P. membranaefaciens- and C. laurentii-treated fruits (Fig. 6). However, in the control fruit, after a transiently increase at the first day, expression of CHI gene gradually decreased. Similarly, the expression of GLU gene in the control fruit showed a significant increase after inoculation with M. fructicola at 2 d, then decreased. There was no obvious difference among different yeast treatments, but the expression of GLU gene in yeast-treated fruits was significantly higher compared to the control in all storage periods. 4. Discussion Fig. 2. Effects of yeast treatments on oxidative damage caused by M. fructicola in peach fruit. (A) Coomassie Brilliant Blue staining of proteins of peach fruit stored at 20 C after 1 and 2 d; (B) Immunodetection of carbonylated proteins of peach fruit stored at 20 C after 1 and 2 d; (C) Coomassie Brilliant Blue staining of proteins of peach fruit stored at 20 C after 3 and 4 d; (D) Immunodetection of carbonylated proteins of peach fruit stored at 20 C after 3 and 4 d. ROS are often detected in plant pathogen interactions and are associated with symptom development. In this experiment, we found that the four yeasts were effective at controlling brown rot caused by M. fructicola in peach fruits (Fig. 1). In order to further verify whether biocontrol yeasts influenced pathogen-induced oxidative damage in peach fruits, the contents of proteins carbonylation were analyzed using anti-dnp antibody. The results showed that carbonylated proteins in yeast-treated fruits was were significantly decreased during storage periods as compared to control fruit (Fig. 2), implying that the antagonistic yeasts had potent efficacy in alleviating pathogen-induced oxidative damage in peach fruit. The mechanism by which antagonistic yeasts mitigated proteins carbonylation or pathogen-induced oxidative stress is complicated. Generally, an appropriate intracellular balance between ROS generation and scavenging exists in all cells. This redox homeostasis requires the efficient coordination of reactions in different cell compartments and is governed by complex signal transduction pathways. Plants possess an array of antioxidants that can protect cells from oxidative damage by scavenging ROS. The scavengers include ascorbate, glutathione, and hydrophobic molecules (tocopherols, carotenoids, and xanthophylls) and detoxifying enzymes that operate in the different cellular organelles (Noctor and Foyer, 1998). These enzymes include SOD, CAT and POD, which work together with other enzymes of the ascorbate glutathione cycle to promote the scavenging of ROS (Hernandez et al., 2001). SOD catalyzes the dismutation of O 2 to H 2 O 2 and O 2. CAT is present in the peroxisomes of nearly all aerobic cells (Dionisio-Sese and Tobita, 1998). It can protect the cell from H 2 O 2 by catalyzing its decomposition into O 2 and H 2 O (Foyer and Noctor, 2000). POD is widely distributed in all higher plants and protects cells against the destructive influence of H 2 O 2 by catalyzing its decomposition through the oxidation of phenolic and enodiolic cosubstrates (Asada, 1992; Borsani et al., 2001). In this study, P. membranaefaciens and C. laurentii significantly stimulated the activities of antioxidant enzymes CAT and POD (Fig. 3), and the expressions of CAT and POD genes in yeast-treated fruits were also increased compared to the control (Fig. 4). Moreover, C. guilliermondii and R. glutinis could induce the activities of CAT and POD (Figs. 3 and 4). These results supported our previous findings, namely, P. membranaefaciens and C. laurentii could stimulate antioxidant activities, such as SOD, methionine sulfoxide reductase (MSR), glutathione peroxidase (GPX), and polyphenol oxidase (PPO) in peach fruit (Wang et al., 2004; Chan et al., 2007). These results indicated that the high levels of CAT and POD elicited by the microbial biocontrol agents played important roles in reducing damage caused by pathogen, which partially account for the

5 X. Xu et al. / International Journal of Food Microbiology 126 (2008) Fig. 3. Effects of yeast treatments on CAT and POD activities in peach fruit stored at 20 C. Bars represent standard deviations of the means. Fig. 5. Effects of yeast treatments on chitinase and β-1,3-glucanase activities in peach fruit stored at 20 C. Bars represent standard deviations of the means. observed delay in symptom development in yeast-treated peach fruits. Thus, we considered that the mechanisms by which biocontrol agents inhibit decay development may be related to the mitigation of proteins carbonylation and alleviation of pathogen-induced ROS. Besides the induction of antioxidants, the expression of PR proteins gene is also associated with the generation of ROS in plant defense responses. The present study showed that yeast treatments significantly stimulated the activities of chitinase and β-1,3-glucanase and the expressions of corresponding genes in peach fruit (Figs. 5 and 6). Chitinase and β-1,3-glucanase are the most fully characterized PR proteins, which are capable of hydrolyzing polymers of fungal cell walls, and were suggested to be involving in plant defense against fungal infection (Bartnicki-Garcia, 1968). The accumulation of chitinase and β-1,3-glucanase is important in retarding fungal growth and decreasing spoilage of fruits caused by fungal pathogens. Taken together, the novel findings of this study included: (i) The microbial biocontrol agents could reduce the level of proteins carbonylation in response to ROS caused by fungal pathogen; Fig. 4. Effects of yeast treatments on CAT and POD mrna expression in peach fruit stored at 20 C. Twenty micrograms of total RNA from peach fruit were was fractionated by gel electrophoresis, blotted and hybridized with probes. The intensity of the bands was quantified by scanning densitometry of the autoradiographs. Optical densities values were normalized to the maximum value and expressed as percentage of relative intensity. Equal loading of samples of total RNA was identified by visualization of rrna that had been stained with ethidium bromide. Fig. 6. Effects of yeast treatments on CHI and GLU mrna expression in peach fruit stored at 20 C. Twenty micrograms of total RNA from peach fruit were was fractionated by gel electrophoresis, blotted and hybridized with probes. The intensity of the bands was quantified by scanning densitometry of the autoradiographs. Optical densities values were normalized to the maximum value and expressed as percentage of relative intensity. Equal loading of samples of total RNA was identified by visualization of rrna that had been stained with ethidium bromide.

6 158 X. Xu et al. / International Journal of Food Microbiology 126 (2008) (ii) Antioxidant defense response is involved in the mechanisms of antagonistic yeast against fungal pathogen and plays an important role in mitigating pathogen-induced oxidative stress to peach fruits, which add new information for the pathway of induced resistance by antagonistic yeast. Acknowledgements This study was supported by the Knowledge Innovation Program of the Chinese Academy of Sciences (KSCX2-YW-N-007) and the National Natural Science Foundation of China ( ; ). References Asada, K., Ascorbate peroxidase: a hydrogen peroxide-scavenging enzyme in plants. Plant Physiology 85, Bartnicki-Garcia, S., Cell wall chemistry, morphogenesis taxonomy of fungi. Annual Reviews of Microbiology 22, Beligni, M.V., Fath, A., Bethke, P.C., Lamattina, L., Jones, R.L., Nitric oxide acts as an antioxidant and delays programmed cell death in barley aleurone layers. Plant Physiology 129, Borsani, O., Valpuesta, V., Botella, M.A., Evidence for a role of salicylic acid in the oxidative damage generated by NaCl and osmotic stress in Arabidopsis seedlings. Plant Physiology 126, Bradford, M.M., A Rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Analytical Biochemistry 72, Campo, S., Carrascal, M., Coca, M., Abian, J., Segundo, B.S., The defense response of germinating maize embryos against fungal infection: a proteomics approach. Proteomics 4, Cavalcanti, F.R., Oliveira, J.T.A., Martins-Miranda, A.S., Gas, R.A.V., Silveira, J.A.G., Superoxide dismutase, catalase and peroxidase activities do not confer protection against oxidative damage in saltstressed cowpea leaves. New Phytologist 163, Chan, Z.L., Tian, S.P., Interaction of antagonistic yeasts against postharvest pathogens of apple fruit and possible mode of action. Postharvest Biology and Technology 36, Chan, Z.L., Qin, G.Z., Xu, X.B., Li, B.Q., Tian, S.P., Proteome approach to characterize proteins induced by antagonist yeast and salicylic acid in peach fruit. Journal of Proteome Research 6, Conrad, C.C., Marshall, P.L., Talent, J.M., Malakowsky, C.A., Choi, J., Gracy, R.W., Oxidized proteins in Alzheimer's plasma. Biochemical and Biophysical Research Communications 275, Doke, N., Generation of superoxide anion by potato-tuber protoplasts during the hypersensitive response to hyphal wall components of Phytophthora infestans and specific-inhibition of the reaction by suppressors of hypersensitivity. Physiol. Plant Pathol. 23, Dionisio-Sese, M.L., Tobita, S., Antioxidant responses of rice seedlings to salinity stress. Plant Science 135, 1 9. Fan, Q., Tian, S.P., Postharvest biological control of Rhizopus rot on nectarine fruit by Pichia membranaefaciens Hansen. Plant Disease 84, Fan, Q., Tian, S.P., Xu, Y., Wang, Y., Jiang, A.L., Biological control of Rhizopus rot of peach fruits by Candida guilliermondii. Acta Botanic Sinica 42, Foyer, C.H., Noctor, G., Oxygen processing in photosynthesis: regulation and signalling. New Phytologist 146, Gayoso, C., Pomar, F., Merino, F., Bernal, M.A., Oxidative metabolism and phenolic compounds in Capsicum annuum L. var. annuum infected by Phytophthora capsici Leon. Scientia Horticulturae 102, Halliwell, B., Gut, teridge, J.M.C., Free Radicals in Biology and Medicine, 3rd ed. Oxford University Press, London. Hernandez, J.A., Ferrer, M.A., Jimenez, A., Barcelo, A.R., Sevilla, F., Antioxidant systems and O 2 /H 2 O 2 production in the apoplast of pea leaves. Its relation with saltinduced necrotic lesions in minor veins. Plant Physiology 127, Ippolito, A., Ghaouth, A.E., Wilson, C.L., Wisniewski, M., Control of postharvest decay of apple fruit by Aureobasidium pullulans and induction of defense responses. Postharvest Biology and Technology 19, Isabella, D.D., Daniela, G., Roberto, C., Ranieri, R., Aldo, M., Protein carbonylation in human diseases TRENDS in Molecular Medicine 9. Janisiewicz, W.J., Korsten, L., Biological control of postharvest disease of fruits. Annual Reviews of Phytopathology 40, Jetiyanon, K., Defensive-related enzyme response in plants treated with a mixture of Bacillus strains (IN937a and IN937b) against different pathogens. Biological Control 42, Jung, S., Effect of chlorophyll reduction in Arabidopsis thaliana by methyl jasmonate or norflurazon on antioxidant systems. Plant Physiology and Biochemistry 42, Kwon, S.I., Anderson, A.J., Differential production of superoxide dismutase and catalase isozymes during infection of wheat by a Fusarium proliferatum-like fungal isolate. Physiology Molecular Plant Pathology 58, Laemmli, U.K., Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227, Lamb, C., Dixon, R.A., The oxidative burst in plant disease resistance. Annual Review of Plant Physiology and Plant Molecular Biology 48, Levine, A., Tenhaken, R., Dixon, R., Lamb, C., 1994a. H 2 O 2 from the oxidative burst orchestrates the plant hypersensitive disease resistance response. Cell 79, Levine, R.L., Williams, J.A., Stadtman, E.R., Shacter, E., 1994b. Carbonyl assays for determination of oxidatively modified proteins. Methods Enzymol. 233, Mittler, R., Oxidative stress, antioxidants and stress tolerance. Trends Plant Sci 7, Noctor, G., Foyer, C.H., Ascorbate and glutathione: keeping active oxygen under control. Annual Review of Plant Physiology and Plant Molecular Biology 49, Pothika, T.S., Collins, C.C., Johnson, D.I., Delmer, D.P., Levine, A., The involvement of hydrogen peroxide in the differentiation of secondary walls in cotton fibers. Plant Physiology 119, Qin, G.Z., Tian, S.P., Chan, Z.L., Li, B.Q., Crucial role of antioxidant proteins and hydrolytic enzymes in pathogenicity of Penicillium Expansum. Molecular and Cellular Proteomics 6, Sequeira, L., Mechanisms of induced resistance in plants. Annu. Rev. Microbiol. 37, Silva, H.S.A., Romeiro, R.d.S., Macagnan, D., Halfeld-Vieira, B.d.A., Pereira, M.C.B., Mounteer, A., Rhizobacterial induction of systemic resistance in tomato plants non-specific protection and increase in enzyme activities. Biological Control 29, Sutherland, M.W., The generation of oxygen radicals during host plant responses to infection. Physiology Molecular Plant Pathology 39, Tian, S.P., Qin, G.Z., Xu, Y., Survival of antagonistic yeasts under field conditions and their biocontrol ability against postharvest diseases of sweet cherry. Postharvest Biology and Technology 33, Tian, S.P., Wan, Y.K., Qin, G.Z., Xu, Y., Induction of defense responses against Alternaria rot by different elicitors in harvested pear fruit. Appl Microbiol Biotechnol. 70, Tian, S.P., Yao, H.J., Deng, X., Xu, X.B., Qin, G.Z., Chan, Z.L., Characterization and expression of β-1, 3-glucanase genes in jujube fruit induced by the biocontrol microbial agent Pichia membranaefaciens. Phytopathology 97, VanLoon, L.C., Induced resistance in plants and the role of pathogenesis-related proteins. Eur J Plant Pathol. 103, Wang, Y.S., Tian, S.P., Xu, Y., Qin, G.Z., Yao, H.J., Changes in the activities of pro- and anti-oxidant enzymes in peach fruit inoculated with Cryptococcus laurentii or Penicillium expansum at 0 or 20 C. Postharvest Biology and Technology 34, Wirth, S.J., Wolf, G.A., Dye-labelled substrates for the assay and detection of chitinase and lysozyme activity. journal of Microbiological Methods 12, Wisniewski, M., Biles, C., Droby, S., McLaughlin, R., Wilson, C., Chalutz, E., Mode of action of the postharvest biocontrol yeast Pichia guilliermondii: characterization of attachment to Botrytis cinerea. Physiology Molecular Plant Pathology 39, Yao, H.J., Tian, S.P., Effect of pre- and post-harvest application of salicylic acid or methyl jasmonate on inducing disease resistance of sweet cherry fruit in storage. Postharvest Biology and Technology 35,

Reducing oxidative stress in sweet cherry fruit by Pichia membranaefaciens: a possible mode of action against Penicillium expansum

Reducing oxidative stress in sweet cherry fruit by Pichia membranaefaciens: a possible mode of action against Penicillium expansum Journal of Applied Microbiology ISSN 1364-572 ORIGINAL ARTICLE Reducing oxidative stress in sweet cherry fruit by Pichia membranaefaciens: a possible mode of action against Penicillium expansum X.B. Xu

More information

Dot Blot Analysis. Teacher s Guidebook. (Cat. # BE 502) think proteins! think G-Biosciences www.gbiosciences.com

Dot Blot Analysis. Teacher s Guidebook. (Cat. # BE 502) think proteins! think G-Biosciences www.gbiosciences.com PR110 G-Biosciences 1-800-628-7730 1-314-991-6034 technical@gbiosciences.com A Geno Technology, Inc. (USA) brand name Dot Blot Analysis Teacher s Guidebook (Cat. # BE 502) think proteins! think G-Biosciences

More information

DP419 RNAsimple Total RNA Kit. RNAprep pure Series. DP501 mircute mirna Isolation Kit. DP438 MagGene Viral DNA / RNA Kit. DP405 TRNzol Reagent

DP419 RNAsimple Total RNA Kit. RNAprep pure Series. DP501 mircute mirna Isolation Kit. DP438 MagGene Viral DNA / RNA Kit. DP405 TRNzol Reagent Overview of TIANGEN Products DP419 RNAsimple Total RNA Kit DP430 RNAprep pure Kit(For Cell/Bacteria) DP315/DP315-R TIANamp Virus DNA/RNA Kit DP431 RNAprep pure Kit (For Tissue) Silica-membrane Technology

More information

Pharmaceutical Biotechnology. Recombinant DNA technology Western blotting and SDS-PAGE

Pharmaceutical Biotechnology. Recombinant DNA technology Western blotting and SDS-PAGE Pharmaceutical Biotechnology Recombinant DNA technology Western blotting and SDS-PAGE Recombinant DNA Technology Protein Synthesis Western Blot Western blots allow investigators to determine the molecular

More information

Chapter 3 Contd. Western blotting & SDS PAGE

Chapter 3 Contd. Western blotting & SDS PAGE Chapter 3 Contd. Western blotting & SDS PAGE Western Blot Western blots allow investigators to determine the molecular weight of a protein and to measure relative amounts of the protein present in different

More information

Reactive oxygen species in leaves and how to catch these

Reactive oxygen species in leaves and how to catch these Reactive oxygen species in leaves and how to catch these Éva Hideg Molecular Stress- & Photobiology Group, BRC Szeged EPPN Summer School 2013 Outline How to prove that ROS are involved? The central role

More information

Western Blotting. USA: proteintech@ptglab.com UK & Europe: europe@ptglab.com China: service@ptglab.com. www.ptglab.com

Western Blotting. USA: proteintech@ptglab.com UK & Europe: europe@ptglab.com China: service@ptglab.com. www.ptglab.com Western Blotting All steps are carried out at room temperature unless otherwise indicated. Recipes for all solutions highlighted bold are included at the end of the protocol. SDS-PAGE 1. Construct an SDS-PAGE

More information

HiPer RT-PCR Teaching Kit

HiPer RT-PCR Teaching Kit HiPer RT-PCR Teaching Kit Product Code: HTBM024 Number of experiments that can be performed: 5 Duration of Experiment: Protocol: 4 hours Agarose Gel Electrophoresis: 45 minutes Storage Instructions: The

More information

The Physiology of Hyperbaric Oxygen Therapy. Free Radicals and Reactive Oxygen Species. I. Introduction Definition, Source, function and Purpose

The Physiology of Hyperbaric Oxygen Therapy. Free Radicals and Reactive Oxygen Species. I. Introduction Definition, Source, function and Purpose The Physiology of Hyperbaric Oxygen Therapy Free Radicals and Reactive Oxygen Species I. Introduction Definition, Source, function and Purpose A. Definition of free radicals and reactive oxygen species

More information

Running protein gels and detection of proteins

Running protein gels and detection of proteins Running protein gels and detection of proteins 1. Protein concentration determination using the BIO RAD reagent This assay uses a colour change reaction to give a direct measurement of protein concentration.

More information

Protein immunoblotting

Protein immunoblotting Protein immunoblotting (Western blotting) Dr. Serageldeen A. A. Sultan Lecturer of virology Dept. of Microbiology SVU, Qena, Egypt seaas@lycos.com Western blotting -It is an analytical technique used to

More information

First Strand cdna Synthesis

First Strand cdna Synthesis 380PR 01 G-Biosciences 1-800-628-7730 1-314-991-6034 technical@gbiosciences.com A Geno Technology, Inc. (USA) brand name First Strand cdna Synthesis (Cat. # 786 812) think proteins! think G-Biosciences

More information

Biotechnology and Recombinant DNA (Chapter 9) Lecture Materials for Amy Warenda Czura, Ph.D. Suffolk County Community College

Biotechnology and Recombinant DNA (Chapter 9) Lecture Materials for Amy Warenda Czura, Ph.D. Suffolk County Community College Biotechnology and Recombinant DNA (Chapter 9) Lecture Materials for Amy Warenda Czura, Ph.D. Suffolk County Community College Primary Source for figures and content: Eastern Campus Tortora, G.J. Microbiology

More information

Induction of Enzyme Activity in Bacteria:The Lac Operon. Preparation for Laboratory: Web Tutorial - Lac Operon - submit questions

Induction of Enzyme Activity in Bacteria:The Lac Operon. Preparation for Laboratory: Web Tutorial - Lac Operon - submit questions Induction of Enzyme Activity in Bacteria:The Lac Operon Preparation for Laboratory: Web Tutorial - Lac Operon - submit questions I. Background: For the last week you explored the functioning of the enzyme

More information

Molecular Biology Techniques: A Classroom Laboratory Manual THIRD EDITION

Molecular Biology Techniques: A Classroom Laboratory Manual THIRD EDITION Molecular Biology Techniques: A Classroom Laboratory Manual THIRD EDITION Susan Carson Heather B. Miller D.Scott Witherow ELSEVIER AMSTERDAM BOSTON HEIDELBERG LONDON NEW YORK OXFORD PARIS SAN DIEGO SAN

More information

Nitrotyrosine Western blot starter pack

Nitrotyrosine Western blot starter pack Nitrotyrosine Western blot starter pack Cat no. A010-513 A convenient reagent pack containing Badrilla s high integrity nitrotyrosine monoclonal antibody (clone 2E11) and associated positive and negative

More information

CLINICAL STUDY OF MARKETED AYURVEDIC PREPARATION IN THYROID INDUCED STRESS A. A. ROY* 1, K. R. KAKADE 2, R.P. BHOLE 1, V. B.

CLINICAL STUDY OF MARKETED AYURVEDIC PREPARATION IN THYROID INDUCED STRESS A. A. ROY* 1, K. R. KAKADE 2, R.P. BHOLE 1, V. B. International Journal of PharmTech Research CODEN( USA): IJPRIF ISSN : 0974-4304 Vol.1, No.3, pp 870-874, July-Sept 2009 CLINICAL STUDY OF MARKETED AYURVEDIC PREPARATION IN THYROID INDUCED STRESS A. A.

More information

Methionine Sulfoxide Immunoblotting Kit

Methionine Sulfoxide Immunoblotting Kit Methionine Sulfoxide Immunoblotting Kit Item No. 600160 Customer Service 800.364.9897 * Technical Support 888.526.5351 www.caymanchem.com TABLE OF CONTENTS GENERAL INFORMATION 3 Materials Supplied 4 Precautions

More information

UTILIZATION of PLASMA ACTIVATED WATER in Biotechnology, Pharmacology and Medicine. JSC TECHNOSYSTEM-ECO Moscow, Russia April, 2009

UTILIZATION of PLASMA ACTIVATED WATER in Biotechnology, Pharmacology and Medicine. JSC TECHNOSYSTEM-ECO Moscow, Russia April, 2009 UTILIZATION of PLASMA ACTIVATED WATER in Biotechnology, Pharmacology and Medicine JSC TECHNOSYSTEM-ECO Moscow, Russia April, 2009 METHOD of WATER ACTIVATION with PLASMA of GAS DISCHARGE ANODE VACUUM WATER

More information

Protein extraction from Tissues and Cultured Cells using Bioruptor Standard & Plus

Protein extraction from Tissues and Cultured Cells using Bioruptor Standard & Plus Protein extraction from Tissues and Cultured Cells using Bioruptor Standard & Plus Introduction Protein extraction from tissues and cultured cells is the first step for many biochemical and analytical

More information

RevertAid Premium First Strand cdna Synthesis Kit

RevertAid Premium First Strand cdna Synthesis Kit RevertAid Premium First Strand cdna Synthesis Kit #K1651, #K1652 CERTIFICATE OF ANALYSIS #K1651 Lot QUALITY CONTROL RT-PCR using 100 fg of control GAPDH RNA and GAPDH control primers generated a prominent

More information

Protein transfer from SDS-PAGE to nitrocellulose membrane using the Trans-Blot SD cell (Western).

Protein transfer from SDS-PAGE to nitrocellulose membrane using the Trans-Blot SD cell (Western). Western Blot SOP Protein transfer from SDS-PAGE to nitrocellulose membrane using the Trans-Blot SD cell (Western). Date: 8/16/05, 10/31/05, 2/6/06 Author: N.Oganesyan, R. Kim Edited by: R. Kim Summary:

More information

1. The diagram below represents a biological process

1. The diagram below represents a biological process 1. The diagram below represents a biological process 5. The chart below indicates the elements contained in four different molecules and the number of atoms of each element in those molecules. Which set

More information

6 Characterization of Casein and Bovine Serum Albumin

6 Characterization of Casein and Bovine Serum Albumin 6 Characterization of Casein and Bovine Serum Albumin (BSA) Objectives: A) To separate a mixture of casein and bovine serum albumin B) to characterize these proteins based on their solubilities as a function

More information

CompleteⅡ 1st strand cdna Synthesis Kit

CompleteⅡ 1st strand cdna Synthesis Kit Instruction Manual CompleteⅡ 1st strand cdna Synthesis Kit Catalog # GM30401, GM30402 Green Mountain Biosystems. LLC Web: www.greenmountainbio.com Tel: 800-942-1160 Sales: Sales@ greenmountainbio.com Support:

More information

Course Curriculum for Master Degree in Medical Laboratory Sciences/Clinical Microbiology, Immunology and Serology

Course Curriculum for Master Degree in Medical Laboratory Sciences/Clinical Microbiology, Immunology and Serology Course Curriculum for Master Degree in Medical Laboratory Sciences/Clinical Microbiology, Immunology and Serology The Master Degree in Medical Laboratory Sciences / Clinical Microbiology, Immunology or

More information

Western Blotting: Mini-gels

Western Blotting: Mini-gels Western Blotting: Mini-gels Materials a Protein Extraction Buffer (for callus or kernel), Solution Stock Final Volume Tris-HCl ph 80 1 M 200 mm 20 ml NaCl 4 M 100 mm 25 ml Sucrose 2 M 400 mm 20 ml EDTA

More information

Thermo Scientific DyNAmo cdna Synthesis Kit for qrt-pcr Technical Manual

Thermo Scientific DyNAmo cdna Synthesis Kit for qrt-pcr Technical Manual Thermo Scientific DyNAmo cdna Synthesis Kit for qrt-pcr Technical Manual F- 470S 20 cdna synthesis reactions (20 µl each) F- 470L 100 cdna synthesis reactions (20 µl each) Table of contents 1. Description...

More information

DNA Fingerprinting. Unless they are identical twins, individuals have unique DNA

DNA Fingerprinting. Unless they are identical twins, individuals have unique DNA DNA Fingerprinting Unless they are identical twins, individuals have unique DNA DNA fingerprinting The name used for the unambiguous identifying technique that takes advantage of differences in DNA sequence

More information

Optimal Conditions for F(ab ) 2 Antibody Fragment Production from Mouse IgG2a

Optimal Conditions for F(ab ) 2 Antibody Fragment Production from Mouse IgG2a Optimal Conditions for F(ab ) 2 Antibody Fragment Production from Mouse IgG2a Ryan S. Stowers, 1 Jacqueline A. Callihan, 2 James D. Bryers 2 1 Department of Bioengineering, Clemson University, Clemson,

More information

Southern Blot Analysis (from Baker lab, university of Florida)

Southern Blot Analysis (from Baker lab, university of Florida) Southern Blot Analysis (from Baker lab, university of Florida) DNA Prep Prepare DNA via your favorite method. You may find a protocol under Mini Yeast Genomic Prep. Restriction Digest 1.Digest DNA with

More information

VLLM0421c Medical Microbiology I, practical sessions. Protocol to topic J10

VLLM0421c Medical Microbiology I, practical sessions. Protocol to topic J10 Topic J10+11: Molecular-biological methods + Clinical virology I (hepatitis A, B & C, HIV) To study: PCR, ELISA, your own notes from serology reactions Task J10/1: DNA isolation of the etiological agent

More information

Antioxidant Products. A comprehensive range of. Antioxidants

Antioxidant Products. A comprehensive range of. Antioxidants Antioxidant Products A comprehensive range of ALB BIL FERR GR Ransel Ransod antioxidant TAS testing TIBC kits TF BIL FERR GR Ransel Ransod TAS TIBC TF UA A FERR GR Ransel Ransod TAS TIBC TF UA ALB GR Ransel

More information

Efficient Multi-Well Protein Purification Strategies

Efficient Multi-Well Protein Purification Strategies Application Note PN 33576 Efficient Multi-Well Protein Purification Strategies Introduction Many tools and techniques are available today for protein purification. Development of a purification process

More information

WHY IS THIS IMPORTANT?

WHY IS THIS IMPORTANT? CHAPTER 10 BACTERIAL GROWTH Eye of Science / Science Photo Library WHY IS THIS IMPORTANT? Increase in numbers is one of the requirements for infection. This increase is dependent upon bacterial growth.

More information

Methods of Grading S/N Style of grading Percentage Score 1 Attendance, class work and assignment 10 2 Test 20 3 Examination 70 Total 100

Methods of Grading S/N Style of grading Percentage Score 1 Attendance, class work and assignment 10 2 Test 20 3 Examination 70 Total 100 COURSE: MIB 303 Microbial Physiology and Metabolism (3 Units- Compulsory) Course Duration: Three hours per week for 15 weeks (45 hours). Lecturer: Jimoh, S.O. B.Sc., M.Sc, Ph.D Microbiology (ABU, Zaria)

More information

Bacterial Transformation with Green Fluorescent Protein. Table of Contents Fall 2012

Bacterial Transformation with Green Fluorescent Protein. Table of Contents Fall 2012 Bacterial Transformation with Green Fluorescent Protein pglo Version Table of Contents Bacterial Transformation Introduction..1 Laboratory Exercise...3 Important Laboratory Practices 3 Protocol...... 4

More information

Detection of proteins by lithium dodecyl sulphate polyacrylamide gel electrophoresis

Detection of proteins by lithium dodecyl sulphate polyacrylamide gel electrophoresis Detection of proteins by lithium dodecyl sulphate polyacrylamide gel electrophoresis During electrophoretic measurements a mixture of compounds in solution is taken into a chamber, two electrodes are joined

More information

Laboratory 5: Properties of Enzymes

Laboratory 5: Properties of Enzymes Laboratory 5: Properties of Enzymes Technical Objectives 1. Accurately measure and transfer solutions with pipettes 2. Use a Spectrophotometer to study enzyme action. 3. Properly graph a set of data. Knowledge

More information

ab185916 Hi-Fi cdna Synthesis Kit

ab185916 Hi-Fi cdna Synthesis Kit ab185916 Hi-Fi cdna Synthesis Kit Instructions for Use For cdna synthesis from various RNA samples This product is for research use only and is not intended for diagnostic use. Version 1 Last Updated 1

More information

Microarray Technology

Microarray Technology Microarrays And Functional Genomics CPSC265 Matt Hudson Microarray Technology Relatively young technology Usually used like a Northern blot can determine the amount of mrna for a particular gene Except

More information

Northern blot analysis for microrna. (Narry Kim s lab)

Northern blot analysis for microrna. (Narry Kim s lab) Northern blot analysis for microrna (Narry Kim s lab) Materials 1. 10~50 μg of total RNA extracted from HeLa cells treated with sirna 2. RNA loading buffer 3. Probe: DNA oligonucleotide complementary to

More information

Covalent Conjugation to Cytodiagnostics Carboxylated Gold Nanoparticles Tech Note #105

Covalent Conjugation to Cytodiagnostics Carboxylated Gold Nanoparticles Tech Note #105 Covalent Conjugation to Cytodiagnostics Carboxylated Gold Nanoparticles Tech Note #105 Background Gold nanoparticle conjugates have been widely used in biological research and biosensing applications.

More information

serum protein and A/ G ratio

serum protein and A/ G ratio serum protein and A/ G ratio Blood plasma contains at least 125 individual proteins. Serum ( as contrasted with plasma) is deficient in those coagulation protein which are consumed during the process of

More information

WESTERN BLOTTING TIPS AND TROUBLESHOOTING GUIDE TROUBLESHOOTING GUIDE

WESTERN BLOTTING TIPS AND TROUBLESHOOTING GUIDE TROUBLESHOOTING GUIDE WESTERN BLOTTING TIPS AND TROUBLESHOOTING GUIDE TIPS FOR SUCCESSFUL WESTERB BLOTS TROUBLESHOOTING GUIDE 1. Suboptimal protein transfer. This is the most common complaint with western blotting and could

More information

Human serum albumin (HSA) nanoparticles stabilized with. intermolecular disulfide bonds. Supporting Information

Human serum albumin (HSA) nanoparticles stabilized with. intermolecular disulfide bonds. Supporting Information Human serum albumin (HSA) nanoparticles stabilized with intermolecular disulfide bonds Wentan Wang, Yanbin Huang*, Shufang Zhao, Ting Shao and Yi Cheng* Department of Chemical Engineering, Tsinghua University,

More information

Chemical reaction (slow): Enzyme-catalyzed reaction (much faster):

Chemical reaction (slow): Enzyme-catalyzed reaction (much faster): 1 Enzymes Introduction Enzymes are Biological Catalysts Recall that a catalyst is an agent which speeds up a chemical reaction without actually being consumed or changed by the reaction. Enzymes are proteins

More information

The Techniques of Molecular Biology: Forensic DNA Fingerprinting

The Techniques of Molecular Biology: Forensic DNA Fingerprinting Revised Fall 2011 The Techniques of Molecular Biology: Forensic DNA Fingerprinting The techniques of molecular biology are used to manipulate the structure and function of molecules such as DNA and proteins

More information

2.1.2 Characterization of antiviral effect of cytokine expression on HBV replication in transduced mouse hepatocytes line

2.1.2 Characterization of antiviral effect of cytokine expression on HBV replication in transduced mouse hepatocytes line i 1 INTRODUCTION 1.1 Human Hepatitis B virus (HBV) 1 1.1.1 Pathogenesis of Hepatitis B 1 1.1.2 Genome organization of HBV 3 1.1.3 Structure of HBV virion 5 1.1.4 HBV life cycle 5 1.1.5 Experimental models

More information

Essentials of Real Time PCR. About Sequence Detection Chemistries

Essentials of Real Time PCR. About Sequence Detection Chemistries Essentials of Real Time PCR About Real-Time PCR Assays Real-time Polymerase Chain Reaction (PCR) is the ability to monitor the progress of the PCR as it occurs (i.e., in real time). Data is therefore collected

More information

Real-Time PCR Vs. Traditional PCR

Real-Time PCR Vs. Traditional PCR Real-Time PCR Vs. Traditional PCR Description This tutorial will discuss the evolution of traditional PCR methods towards the use of Real-Time chemistry and instrumentation for accurate quantitation. Objectives

More information

Effects of Antibiotics on Bacterial Growth and Protein Synthesis: Student Laboratory Manual

Effects of Antibiotics on Bacterial Growth and Protein Synthesis: Student Laboratory Manual Effects of Antibiotics on Bacterial Growth and Protein Synthesis: Student Laboratory Manual I. Purpose...1 II. Introduction...1 III. Inhibition of Bacterial Growth Protocol...2 IV. Inhibition of in vitro

More information

Mir-X mirna First-Strand Synthesis Kit User Manual

Mir-X mirna First-Strand Synthesis Kit User Manual User Manual Mir-X mirna First-Strand Synthesis Kit User Manual United States/Canada 800.662.2566 Asia Pacific +1.650.919.7300 Europe +33.(0)1.3904.6880 Japan +81.(0)77.543.6116 Clontech Laboratories, Inc.

More information

PROTOCOL 1850 Millrace Drive, Suite 3A Eugene, Oregon 97403 www.mitosciences.com

PROTOCOL 1850 Millrace Drive, Suite 3A Eugene, Oregon 97403 www.mitosciences.com PROTOCOL Western Blotting Transfer and Detection Procedure 1850 Millrace Drive, Suite 3A Eugene, Oregon 97403 02-11 DESCRIPTION Western Blotting Transfer and Detection Procedure ADDITIONAL MATERIALS REQUIRED

More information

Genolution Pharmaceuticals, Inc. Life Science and Molecular Diagnostic Products

Genolution Pharmaceuticals, Inc. Life Science and Molecular Diagnostic Products Genolution Pharmaceuticals, Inc. Revolution through genes, And Solution through genes. Life Science and Molecular Diagnostic Products www.genolution1.com TEL; 02-3010-8670, 8672 Geno-Serum Hepatitis B

More information

Ann.wellhouse@TouchStoneScience.net 1. Enzyme Function

Ann.wellhouse@TouchStoneScience.net 1. Enzyme Function Ann.wellhouse@TouchStoneScience.net 1 Enzyme Function National Science Standards Science as Inquiry: Content Standard A: As a result of activities in grades 9-12, all students should develop: Abilities

More information

Protocol for Western Blotting

Protocol for Western Blotting Protocol for Western Blotting Materials Materials used on Day 3 Protease inhibitor stock: 1 μg/μl pepstatin A in DMSO 200 μm leupeptin in OG Buffer 200 mm PMSF: Freshly made. Ex) 34.8 mg PMSF in 1 ml isopropanol

More information

All-in-One mirna qrt-pcr Reagent Kits For quantitative detection of mature mirna

All-in-One mirna qrt-pcr Reagent Kits For quantitative detection of mature mirna All-in-One mirna qrt-pcr Reagent Kits For quantitative detection of mature mirna All-in-One TM mirna First-Strand cdna Synthesis Kit AMRT-0020 (20 RT reactions), AMRT-0060 (60 RT reactions) Used in combination

More information

Western Blot Analysis with Cell Samples Grown in Channel-µ-Slides

Western Blot Analysis with Cell Samples Grown in Channel-µ-Slides Western Blot Analysis with Cell Samples Grown in Channel-µ-Slides Polyacrylamide gel electrophoresis (PAGE) and subsequent analyses are common tools in biochemistry and molecular biology. This Application

More information

PRESTWICK ACADEMY NATIONAL 5 BIOLOGY CELL BIOLOGY SUMMARY

PRESTWICK ACADEMY NATIONAL 5 BIOLOGY CELL BIOLOGY SUMMARY Name PRESTWICK ACADEMY NATIONAL 5 BIOLOGY CELL BIOLOGY SUMMARY Cell Structure Identify animal, plant, fungal and bacterial cell ultrastructure and know the structures functions. Plant cell Animal cell

More information

How To Make A Tri Reagent

How To Make A Tri Reagent TRI Reagent For processing tissues, cells cultured in monolayer or cell pellets Catalog Number T9424 Store at room temperature. TECHNICAL BULLETIN Product Description TRI Reagent is a quick and convenient

More information

Koch s s Postulates. Lesson plan submitted for EDG6905 Communicating Science: Topics in Emerging Pathogens. Sue Latshaw and Asha Brunings

Koch s s Postulates. Lesson plan submitted for EDG6905 Communicating Science: Topics in Emerging Pathogens. Sue Latshaw and Asha Brunings Koch s s Postulates Lesson plan submitted for EDG6905 Communicating Science: Topics in Emerging Pathogens Sue Latshaw and Asha Brunings (Heinrich Hermann) Robert Koch 1843-1910 1910 German physician Isolated

More information

Bacterial Transformation and Plasmid Purification. Chapter 5: Background

Bacterial Transformation and Plasmid Purification. Chapter 5: Background Bacterial Transformation and Plasmid Purification Chapter 5: Background History of Transformation and Plasmids Bacterial methods of DNA transfer Transformation: when bacteria take up DNA from their environment

More information

HBV Quantitative Real Time PCR Kit

HBV Quantitative Real Time PCR Kit Revision No.: ZJ0002 Issue Date: Aug 7 th, 2008 HBV Quantitative Real Time PCR Kit Cat. No.: HD-0002-01 For Use with LightCycler 1.0/LightCycler2.0/LightCycler480 (Roche) Real Time PCR Systems (Pls ignore

More information

Course Curriculum for Master Degree in Medical Laboratory Sciences/Clinical Biochemistry

Course Curriculum for Master Degree in Medical Laboratory Sciences/Clinical Biochemistry Course Curriculum for Master Degree in Medical Laboratory Sciences/Clinical Biochemistry The Master Degree in Medical Laboratory Sciences /Clinical Biochemistry, is awarded by the Faculty of Graduate Studies

More information

Biochemistry. Entrance Requirements. Requirements for Honours Programs. 148 Bishop s University 2015/2016

Biochemistry. Entrance Requirements. Requirements for Honours Programs. 148 Bishop s University 2015/2016 148 Bishop s University 2015/2016 Biochemistry The Biochemistry program at Bishop s is coordinated through an interdisciplinary committee of chemists, biochemists and biologists, providing students with

More information

Product name Company Cat # PowerPac Basic Power supply Bio Rad 165-6019 Mini Protean electrophoresis system Mini trans blot cell Bio Rad 170-3930

Product name Company Cat # PowerPac Basic Power supply Bio Rad 165-6019 Mini Protean electrophoresis system Mini trans blot cell Bio Rad 170-3930 SDS-PAGE and western blot for low molecular weight proteins (2-20kDa) Merav Marom Shamur, Smart Assays Aim: Analysis of low molecular weight proteins by SDS-PAGE and western blot under reducing conditions.

More information

Page finder. 1. Legal 3. 2. Handling 4 2.1. Safety warnings and precautions 4 2.2. Storage 4 2.3. Expiry 4

Page finder. 1. Legal 3. 2. Handling 4 2.1. Safety warnings and precautions 4 2.2. Storage 4 2.3. Expiry 4 GE Healthcare Amersham Low Molecular Weight Calibration Kit for SDS Electrophoresis A lyophilized mixture of six highly purified well-characterized proteins for use in molecular weight determination in

More information

Nucleic Acid Techniques in Bacterial Systematics

Nucleic Acid Techniques in Bacterial Systematics Nucleic Acid Techniques in Bacterial Systematics Edited by Erko Stackebrandt Department of Microbiology University of Queensland St Lucia, Australia and Michael Goodfellow Department of Microbiology University

More information

Bottlenecks in Clinical Source Material Acquisition. Aby J. Mathew, PhD May 5, 2009 ISCT Annual Meeting San Diego, CA amathew@biolifesolutions.

Bottlenecks in Clinical Source Material Acquisition. Aby J. Mathew, PhD May 5, 2009 ISCT Annual Meeting San Diego, CA amathew@biolifesolutions. Bottlenecks in Clinical Source Material Acquisition Aby J. Mathew, PhD May 5, 2009 ISCT Annual Meeting San Diego, CA amathew@biolifesolutions.com Biopreservation What s the issue? Biopreservation considerations

More information

Application of ARs in an organic apple orchard for protection against storage diseases

Application of ARs in an organic apple orchard for protection against storage diseases Primary report 2014 to SLU EkoForsk Application of ARs in an organic apple orchard for protection against storage diseases Project manager: Hilde Nybom, Department of Plant Breeding, SLU. Introduction

More information

Amersham High Molecular Weight Calibration Kit for native electrophoresis

Amersham High Molecular Weight Calibration Kit for native electrophoresis Amersham High Molecular Weight Calibration Kit for native electrophoresis A lyophilized mixture of five highly purified well-characterized proteins for use in molecular weight estimation under non-denaturing

More information

Medical Microbiology Culture Media :

Medical Microbiology Culture Media : Lecture 3 Dr. Ismail I. Daood Medical Microbiology Culture Media : Culture media are used for recognition and identification (diagnosis) of microorganisms. The media are contained in plates (Petri dishes),

More information

Chapter 8. Summary and Perspectives

Chapter 8. Summary and Perspectives Chapter 8 Summary and Perspectives 131 Chapter 8 Summary Overexpression of the multidrug resistance protein MRP1 confer multidrug resistance (MDR) to cancer cells. The contents of this thesis describe

More information

Classic Immunoprecipitation

Classic Immunoprecipitation 292PR 01 G-Biosciences 1-800-628-7730 1-314-991-6034 technical@gbiosciences.com A Geno Technology, Inc. (USA) brand name Classic Immunoprecipitation Utilizes Protein A/G Agarose for Antibody Binding (Cat.

More information

General Technical Dossier Laminarin

General Technical Dossier Laminarin General Technical Dossier Laminarin The choice to produce better Fruits and vegetables Contents Technical dossier Laminarin 1) Plant natural defense mechanisms. 2) Laminarin: mode of action. 3) Laminarin:

More information

Electrophoresis and Electroblotting of Proteins

Electrophoresis and Electroblotting of Proteins Electrophoresis and Electroblotting of Proteins The purpose of the next lab exercises will be to study the relative amounts of β-actin in cells of the B-16 melanoma, liver and muscle of mice. Electrophoresis

More information

LAB 14 ENZYME LINKED IMMUNOSORBENT ASSAY (ELISA)

LAB 14 ENZYME LINKED IMMUNOSORBENT ASSAY (ELISA) STUDENT GUIDE LAB 14 ENZYME LINKED IMMUNOSORBENT ASSAY (ELISA) GOAL The goal of this laboratory lesson is to explain the concepts and technique of enzyme linked immunosorbent assay (ELISA). OBJECTIVES

More information

EZ-Run Protein Gel Solution. EZ-Run Protein Standards. EZ-Run Gel Staining Solution. Traditional SDS-Page Reagents. Protein Electrophoresis

EZ-Run Protein Gel Solution. EZ-Run Protein Standards. EZ-Run Gel Staining Solution. Traditional SDS-Page Reagents. Protein Electrophoresis EZ-Run Protein Gel Solution EZ-Run Protein Standards EZ-Run Gel Staining Solution Traditional SDS-Page Reagents Protein Electrophoresis protein electrophoresis Introduction Sodium dodecyl sulfate polyacrylamide

More information

ECL Western Blotting Substrate INSTRUCTIONS FOR USE OF PRODUCTS W1001 AND W1015.

ECL Western Blotting Substrate INSTRUCTIONS FOR USE OF PRODUCTS W1001 AND W1015. Technical Manual ECL Western Blotting Substrate INSTRUCTIONS FOR USE OF PRODUCTS W1001 AND W1015. PRINTED IN USA. 6/09 ECL Western Blotting Substrate All technical literature is available on the Internet

More information

SDS-PAGE. (June 23, 2005)

SDS-PAGE. (June 23, 2005) SDS-PAGE (June 23, 2005) GATHER REAGENTS & MATERIALS 30% acrylamide/0.8% bisacrylamide (30:1) 4X Tris. Cl/SDS, ph 8.8 4X Tris. Cl/SDS, ph 6.8 Ammonium persulfate, 10% (Make fresh each time.) SDS electrophoresis

More information

Pure-IP Western Blot Detection Kit

Pure-IP Western Blot Detection Kit Product Manual Pure-IP Western Blot Detection Kit Catalog Number PRB-5002 20 blots FOR RESEARCH USE ONLY Not for use in diagnostic procedures Introduction The technique of immunoprecipitation (IP) is used

More information

STANDARD OPERATING PROCEDURE

STANDARD OPERATING PROCEDURE STANDARD OPERATING PROCEDURE Title: Evaluation using Western Blot SOP#: M-103 Version #: 1 Author: R. Saul Date Approved: Feb. 5, 2009 Date Modified: 1. PURPOSE The purpose of this document is to describe

More information

Western Blotting. Prepare samples:

Western Blotting. Prepare samples: Western Blotting Sive Lab Protocol March 2007 Prepare samples: For zebrafish embryos: Option 1: Take live embryos and put into 1.5 ml tube with E3. Centrifuge gently for 1-2 minutes -yolk lipids will rise

More information

Using Digital Photography to Supplement Learning of Biotechnology. Methods

Using Digital Photography to Supplement Learning of Biotechnology. Methods RESEARCH ON LEARNING Using Digital Photography to Supplement Learning of Biotechnology Fran n orf l u s AbstrAct The author used digital photography to supplement learning of biotechnology by students

More information

RT31-020 20 rxns. RT31-100 100 rxns TRANSCRIPTME Enzyme Mix (1) 40 µl 2 x 50 µl 5 x 40 µl

RT31-020 20 rxns. RT31-100 100 rxns TRANSCRIPTME Enzyme Mix (1) 40 µl 2 x 50 µl 5 x 40 µl Components RT31-020 20 rxns RT31-050 50 rxns RT31-100 100 rxns TRANSCRIPTME Enzyme Mix (1) 40 µl 2 x 50 µl 5 x 40 µl 2x RT Master Mix (2) 200 µl 2 x 250 µl 5 x 200 µl RNase H (E. coli) 20 µl 2 x 25 µl

More information

UltraClean Soil DNA Isolation Kit

UltraClean Soil DNA Isolation Kit PAGE 1 UltraClean Soil DNA Isolation Kit Catalog # 12800-50 50 preps New improved PCR inhibitor removal solution (IRS) included Instruction Manual (New Alternative Protocol maximizes yields) Introduction

More information

FACULTY OF MEDICAL SCIENCE

FACULTY OF MEDICAL SCIENCE Doctor of Philosophy in Biochemistry FACULTY OF MEDICAL SCIENCE Naresuan University 73 Doctor of Philosophy in Biochemistry The Biochemistry Department at Naresuan University is a leader in lower northern

More information

Biology 309 Lab Notebook

Biology 309 Lab Notebook Name: Biology 309 Lab Notebook This is a guided lab notebook for you to keep well-organized notes about procedures and record experimental data for experiments as they are performed. It is guided because,

More information

WESTERN BLOT DETECTION KIT Buffers and detection reagents for up to ten 10 x 10 cm 2 blots. Fluorescent detection via: Goat anti-mouse SureLight P3

WESTERN BLOT DETECTION KIT Buffers and detection reagents for up to ten 10 x 10 cm 2 blots. Fluorescent detection via: Goat anti-mouse SureLight P3 WESTERN BLOT DETECTION KIT Buffers and detection reagents for up to ten 10 x 10 cm 2 blots Fluorescent detection via: Goat anti-mouse SureLight P3 Cat. #: WK-P112 6440 Dobbin Road, Suite D Phone (443)

More information

CONTROLLING MICROBIAL GROWTH IN WINE

CONTROLLING MICROBIAL GROWTH IN WINE CONTROLLING MICROBIAL GROWTH IN WINE Learning Outcome. This chapter reviews the many practical features of importance involved in understanding wine microbiology. The student will gain an understanding

More information

CONTENT. Chapter 1 Review of Literature. List of figures. List of tables

CONTENT. Chapter 1 Review of Literature. List of figures. List of tables Abstract Abbreviations List of figures CONTENT I-VI VII-VIII IX-XII List of tables XIII Chapter 1 Review of Literature 1. Vaccination against intracellular pathogens 1-34 1.1 Role of different immune responses

More information

Keystone Review Practice Test Module A Cells and Cell Processes. 1. Which characteristic is shared by all prokaryotes and eukaryotes?

Keystone Review Practice Test Module A Cells and Cell Processes. 1. Which characteristic is shared by all prokaryotes and eukaryotes? Keystone Review Practice Test Module A Cells and Cell Processes 1. Which characteristic is shared by all prokaryotes and eukaryotes? a. Ability to store hereditary information b. Use of organelles to control

More information

Recombinant DNA and Biotechnology

Recombinant DNA and Biotechnology Recombinant DNA and Biotechnology Chapter 18 Lecture Objectives What Is Recombinant DNA? How Are New Genes Inserted into Cells? What Sources of DNA Are Used in Cloning? What Other Tools Are Used to Study

More information

AES Application Focus Blotting Page 1

AES Application Focus Blotting Page 1 AES Application Focus Blotting Page 1 Western Blotting Adapted from Chapter 7, Gel Electrophoresis of Proteins, by David E. Garfin, Pages 197-268, in Essential Cell Biology, Volume 1: Cell Structure, A

More information

Mouse IFN-gamma ELISpot Kit

Mouse IFN-gamma ELISpot Kit Page 1 of 8 Mouse IFN-gamma ELISpot Kit Without Plates With Plates With Sterile Plates Quantity Catalog Nos. 862.031.001 862.031.001P 862.031.001S 1 x 96 tests 862.031.005 862.031.005P 862.031.005S 5 x

More information

The cell lines used in this study were obtained from the American Type Culture

The cell lines used in this study were obtained from the American Type Culture Supplementary materials and methods Cell culture and drug treatments The cell lines used in this study were obtained from the American Type Culture Collection (ATCC) and grown as previously described.

More information

FACULTY OF MEDICAL SCIENCE

FACULTY OF MEDICAL SCIENCE Doctor of Philosophy Program in Microbiology FACULTY OF MEDICAL SCIENCE Naresuan University 171 Doctor of Philosophy Program in Microbiology The time is critical now for graduate education and research

More information

I. ACID-BASE NEUTRALIZATION, TITRATION

I. ACID-BASE NEUTRALIZATION, TITRATION LABORATORY 3 I. ACID-BASE NEUTRALIZATION, TITRATION Acid-base neutralization is a process in which acid reacts with base to produce water and salt. The driving force of this reaction is formation of a

More information

Anatomy and Physiology Placement Exam 2 Practice with Answers at End!

Anatomy and Physiology Placement Exam 2 Practice with Answers at End! Anatomy and Physiology Placement Exam 2 Practice with Answers at End! General Chemical Principles 1. bonds are characterized by the sharing of electrons between the participating atoms. a. hydrogen b.

More information