UDR: UDT + RSYNC. Open Source Fast File Transfer. Allison Heath University of Chicago



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Transcription:

UDR: UDT + RSYNC Open Source Fast File Transfer Allison Heath University of Chicago

Motivation for High Performance Protocols High-speed networks (10Gb/s, 40Gb/s, 100Gb/s,...) Large, distributed datasets TCP does not scale well as network bandwidth-delay product (BDP) increases

UDT: UDP-based Data Transfer Reliable UDP based application level protocol

A Brief History of UDT Started in 2001 (SABUL) Bulk data transfer: control information over TCP, data over UDP Naïve congestion control UDT v2 Both control and data over UDP Fast, fair, and friendly congestion control UDT v3 Configurable congestion control Partial reliability & messaging UDT v4 Multiple UDT sockets on single UDP port Better efficiency and congestion control

Current UDT Feature Summary Protocol design to support reliable, efficient packet processing Efficient native congestion control algorithm Configurable congestion control Optimized implementation as a user level C++ library API, as similar as possible to BSD sockets Supports Linux, BSD, OS X, and Windows Open source BSD license Available at udt.sourceforge.net

UDT Results 2006, 2008, 2009 Supercomputing Bandwidth Challenge Winner Disk to disk 9 Gbps over 10 Gbps long distance links Efficient, fair and stable Flow 1 902 466 313 215 301 452 885 Flow 2 446 308 216 310 452 Flow 3 302 202 307 Flow 4 197 Efficiency 902 912 923 830 918 904 885 Fairness 1 0.999 0.999 0.998 0.999 1 1 Stability 0.11 0.11 0.08 0.16 0.04 0.02 0.04

Moving Forward with UDT Open source and BSD license: udt.sourceforge.net Why has UDT not been more widely adopted? Some answers: Lack of accessibility Lack of knowledge for tuning/configuration required to achieve best performance Goal: Create a suite of easy to use data transfer applications that utilize UDT

UDT: Buffers and CPUs Configuration Change Observed Transfer Rate Time to Transfer 1 TB (minutes) UDT and Linux Defaults 1.6 Gbps 85 Setting buffers sizes to 64 MB Improved CPU on sending side with processor affinity Improved CPU on receiving side with processor affinity on Improved both sending CPU on and both sides rexeicing with processort sides affinity on both sides Removing CPU clock scaling 3.3 Gbps 41 3.7 Gbps 36 4.6 Gbps 29 6.3 Gbps 21 6.7 Gbps 20

UDStar There are a number of familiar data transfer tools that are in use: rsync, scp, ftp, (your favorite here) Goal: make them UDT-enabled with as little effort on the user s part as possible

UDR First component of UDStar UDT + rsync Lightweight wrapper around rsync that allows it to use UDT Made possible because rsync communicates via pipes to the remote shell Utilize the rsync -e option

UDR Implementation

UDR: Current User Perspective Download from GitHub: github.com/labadvcomp/udr Apache 2.0 Licensed Compile, only dependency is OpenSSL Once installed on both sides: udr [udr options] [standard rsync command] Includes encryption based on OpenSSL (off by default) 128, 192, and 256 AES 3DES Blowfish

UDR Server Modeled after rsync server Lightweight python server to handle UDR requests and run the appropriate process on the server Enabled users without accounts to download data Most configurations options are obtained from a provided rsyncd.conf

Evaluating Disk to Disk Transfer Transfers limited by a number of factors: Read speed on source data volume Write speed on destination data volume Lowest bandwidth on connections linking the volumns Round Trip Time (RTT) Normalize performance to be independent of particular disks used: transfer speed / min(source data volume read speed, destination data volume read speed) Long Distance to Local Ratio (LDLR)

UDR Results: 100 GB Transfer Tested between UChicago Kenwood Facility and FIU 10G connection, RTT is 52ms 100 GB transfer Avg Mbps LDLR UDT Memory to Memory 6699 N/A UDT Send/Recv File 2185 0.98 UDR 0.9 (no encryption) 916 0.41 UDR 0.9 (aes-128) 391 0.18 rsync (no encryption) 423 0.19 rsync (aes-128) 249 0.11

UDR Results: ENCODE

UDR Results: UCSC Genome Browser Source Destination UDR (Mbps) rsync (mbps) Santa Cruz, CA Milwaukee, WI 500 160 Santa Cruz, CA Detroit, MI 600 150 Santa Cruz, CA Bielefeld, Germany 600 6 Santa Cruz, CA Aarhus, Denmark 350 6 Santa Cruz, CA Brisbane, Austrialia 500 3

OSDC Public Data via UDR Data currently available via rsync and UDR www.opensciencedatacloud.org/publicdata

Next Steps for UDR Rsync-like server functionality for UDR Testing and improvements Packaging for easier installation Stable 1.0 release in 2013 Current: 0.9.3

Beyond UDR: UDStar Initial UDR component developed and released Next: UDT-enabled SCP FTP? SFTP? Interested in hearing from potential users Other language wrappers for UDT to encourage development, some interest in python, java, others?

THANK YOU github.com/labadvcomp/udr udt.sourceforge.net www.opensciencedatacloud.org