Software Prerequisites Linux Ubuntu 12.04 LTS. Estimated completion time: 15min. The goal of this hands-on is to:



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TRAINING MANUAL Using SAM-BA for Linux on SAMA5D3 Xplained AN-8995 Prerequisites Hardware Prerequisites Atmel SAMA5D3 Xplained USB serial TTL adapter (optional) FTDI TTL-232R-3V3 USB to TTL serial cable Software Prerequisites Linux Ubuntu 12.04 LTS Estimated completion time: 15min Introduction The goal of this hands-on is to: Get Started on SAM-BA for Linux, the Atmel In System Programming tool for Atmel ARM -based MPUs Use SAM-BA Graphical UI to connect to the SAMA5D3 Xplained board Use SAM-BA Command Line mode to program a SAMA5D3 Linux demo 42328A 06/2014

Table of Contents Prerequisites...1 Introduction...1 Icon Key Identifiers...3 1. Introduction to SAM-BA...4 2. Setup...5 3. Assignment 1: Install SAM-BA on Ubuntu 12.04 LTS...6 4. Assignment 2: Connect SAM-BA GUI to SAMA5D3 Xplained...7 4.1 Understand SAM-BA GUI Main Window... 7 4.2 Connect to the Board... 8 5. Assignment 3: Use SAM-BA in Command Line Mode to Program a Demo... 11 6. Conclusion... 17 7. Revision History... 18 Page 2 of 19

Icon Key Identifiers Delivers contextual information about a specific topic. Highlights useful tips and techniques. Highlights objectives to be completed. Highlights the expected result of an assignment step. Indicates important information. Highlights actions to be executed out of the target when necessary. Page 3 of 19

1. Introduction to SAM-BA The SAM-BA GUI tool provides a means of easily programming various Atmel ARM processor-based microcontrollers. SAM-BA GUI Key Features: Performs in-system programming through JTAG, RS232 or USB interfaces On-device and on-board memories programming solutions May be used via a Graphical User Interface or started in batch mode from a command line Memories and peripherals display content User scripts executable from SAM-BA GUI or a shell Runs under Windows or Linux OS SAM-BA for Linux supports only the USB interface. SAM-BA and its patches are available from Atmel web site at the following address: http://www.atmel.com/tools/atmelsam-bain-systemprogrammer.aspx. SAM-BA has been validated on different Linux distributions such as Ubuntu, Debian, Fedora, opensuse but it will certainly work on other distributions as well. Tested distributions are referenced on Linux4SAM web site, which is the main starting point for Linux OS on the Atmel ARM-based MPUs, at the following link: http://www.at91.com/linux4sam/bin/view/linux4sam/softwaretools#tested_linux_distributions. Ubuntu 12.04 LTS will be used as the Linux distribution reference for the next assignments. Page 4 of 19

2. Setup With Ubuntu distributions, a user has to be member of the dialout group to access serial devices like RS232 serial port, USB serial, serial modem, etc. As SAM-BA uses the USB serial class driver to connect to the SAMA5D3 Xplained board, it is important to enable serial devices access to the Ubuntu user. Enable access to serial devices. Add current user to dialout group: # cd ~ # sudo adduser at91sam dialout # cat /etc/group grep dialout dialout:x:20:at91sam Log out from Ubuntu and log in again to make the changes effective and access the serial port Logging out from Ubuntu is mandatory to have the user added to the dialout group. Current user has now access to serial devices including the USB serial port. Page 5 of 19

3. Assignment 1: Install SAM-BA on Ubuntu 12.04 LTS Download, install and patch SAM-BA GUI 2.12 from Linux4SAM ftp: Open a terminal by pressing CTRL+ALT+T Download SAM-BA and SAM-BA patch 5: # cd ~/at91data # wget ftp://ftp.linux4sam.org/pub/sam-ba/sam-ba_2.12.zip # wget ftp://ftp.linux4sam.org/pub/sam-ba/patch5.gz # cd ~ Installation folder chosen for that hands-on is called at91data. SAM-BA is a 32-bit program so requires 32-bit libraries to be installed on Ubuntu 64- bit versions: # uname -machine x86_64 64 means you are using a 64-bit distribution # sudo apt-get install ia32-libs [sudo] password for at91sam: type your password (sam) User is at91sam for that hands-on with sam as password. Use your login/password whenever required if different. Uncompress SAM-BA archive and apply patch 5: # cd /opt # sudo unzip ~/at91data/sam-ba_2.12.zip # cd /opt/samba_cdc_cdc_linux # sudo patch p1 < ~/at91data/patch5.diff Edit.bashrc file to permanently add SAM-BA directory to the PATH variable: # gedit ~/.bashrc Add at the end of the file the following line: export PATH=$PATH:/opt/sam-ba_cdc_cdc_linux Source.bashrc file to have PATH variable updated: source ~/.bashrc SAM-BA for Linux has been successfully installed and patched. Page 6 of 19

4. Assignment 2: Connect SAM-BA GUI to SAMA5D3 Xplained 4.1 Understand SAM-BA GUI Main Window SAM-BA GUI Main window is composed of three different areas as described below: The Memory Display area is used to dump the internal memories as well as the external RAMbased memories The Memory Download area is used to program the different on-board and on-board memories. There is one memory tab per supported memory such as: EEPROM DataFlash Serial Flash NAND Flash DDR2 The TCL Shell area which can be used to execute TCL commands as well as displaying information about the on-going connection/transfers Page 7 of 19

4.2 Connect to the Board To connect the SAMA5D3 Xplained to SAM-BA UI using USB serial port, SAMA5D3 must execute a monitor called SAM-BA Monitor (aka SAM-BA Boot) which is part of the Boot ROM (Standard Boot mode sequence). This monitor is executed only if no valid code is found from the external non-volatile memories supported by the Boot ROM. More information on the Standard Boot mode can be found in the section called Standard Boot Strategies from SAMA5D3 datasheet. The goal is, in a first step, to disable NAND Flash access in case a valid code is programmed in NAND which would prevent SAM-BA Monitor execution. Then, SAM-BA UI will be able to connect to the board. Run SAM-BA Monitor. Open JP5 to disable NAND Flash memory access Plug the USB micro cable between J6 and your computer to boot from the on-chip Boot ROM Close JP5 to enable NAND Flash memory access SAM-BA (Boot) Monitor is executed. Page 8 of 19

Connect the SAMA5D3 Xplained to SAM-BA. Identify the USB connection by monitoring the last lines of dmesg command using tail command: /dev/ttyacmx number will be used to configure the terminal emulator # dmesg grep tty Run SAM-BA application: # /opt/sam-ba_cdc_cdc_linux/sam-ba The following pop-up should appear: Typing directly sam-ba should also work as its path has been added to the PATH variable. Select /dev/ttyacmx as connection Select at91sama5d3x-ek as board Click on Connect Page 9 of 19

SAM-BA Main window should appear which proves the successful connection to the SAMA5D3 Xplained board: Page 10 of 19

5. Assignment 3: Use SAM-BA in Command Line Mode to Program a Demo The goal of this assignment is to program one of the SAMA5D3 demos available on Linux4SAM ftp site using SAM-BA in command line mode. SAM-BA Command Line mode uses TCL scripts to program the different SAMA5D3 Xplained on-board memories without the need to launch a graphical interface. Linux4SAM.org demos are delivered as archives containing all the binaries that must be flashed on the board. Pre-built demo binaries are available on Linux4SAM ftp server: ftp://ftp.linux4sam.org/pub/demo/. Close SAM-BA Get SAMA5D3 Demo Archive and Identify the right demo script. Download demo archive: # cd ~/at91data # wget ftp://ftp.linux4sam.com/pub/demo/linux4sam_4.3/linux4sam-pokysama5d3_xplained-4.3.zip # unzip linux4sam-poky-sama5d3_xplained-4.3.zip Once uncompressed, look at demo content: # cd ~/at91data/linux4sam-poky-sama5d3_xplained-4.3 # ls Different OS-based scripts are available:.bat scripts are to be used with Windows.sh scripts are to be used with Linux There is one OS-based script for each board configuration: SAMA5D3 Xplained without any display: demo_linux_nandflash SAMA5D3 Xplained with PDA 4.3 capacitive display: demo_linux_nandflash_pda4 SAMA5D3 Xplained with PDA 7 capacitive display: demo_linux_nandflash_pda7 Each Windows (.bat) or Linux (.sh) script executes a single TCL script (.tcl) that is responsible for programming the NVM memory with the different Linux binary components (kernel, device tree, root file system ). We will use the SAMA5D3 Xplained without any display extension board. Page 11 of 19

demo_linux_nandflash.sh is the script to execute in order to program the demo on the SAMA5D3 Xplained without any display support: at91-sama5d3_xplained.dtb at91-sama5d3_xplained_pda4.dtb at91-sama5d3_xplained_pda7.dtb regular xplained dtb file (no LCD) xplained + LCD pda 4.3 dtb file xplained + LCD pda 7 dtb file sama5d3_xplained-nandflashboot-uboot-3.6.1.bin u-boot 2013.07 u-boot-sama5d3_xplained-v2013.07-at91-r1.bin at91bootstrap (nandflash boot) zimage-sama5d3_xplained.bin kernel zimage (Linux 3.10-at91) atmel-xplained-demo-image-sama5d3_xplained.ubi root file system (UBIFS) demo_linux_nandflash.bat demo_linux_nandflash_pda4.bat demo_linux_nandflash_pda7.bat demo_linux_nandflash.sh demo_linux_nandflash_pda4.sh demo_linux_nandflash_pda7.sh demo_linux_nandflash.tcl demo_linux_nandflash_pda4.tcl demo_linux_nandflash_pda7.tcl demo_script_linux_nandflash.tcl Windows SAM-BA scripts one for each board variant Linux SAM-BA scripts one for each board variant TCL SAM-BA scripts for configuration one for each board variant main TCL SAM-BA script Page 12 of 19

Monitor Demo Programming Progress using SAMA5D3 DEBUG port. This section is optional as you need to have a USB serial TTL adapter to do it. SAM-BA programming operations can be monitored by tracing the SAMA5D3 DBGU serial port peripheral. The SAMA5D3 Xplained board has a dedicated serial port for debugging, which is accessible through the 6- pin male header J23. Various interfaces can be used as USB/Serial DBGU port bridge, such as a FTDI TTL-232R-3V3 USB to TTL serial cable or a basic breakout board for the 232/USB converter. We will use a USB serial TTL adapter to connect the SAMA5D3 Xplained board to the computer. Plug the USB serial TTL adapter to your computer The USB-serial driver is already installed on a Linux OS and should appear as a /dev/ttyusbx device when plugged. Identify the USB connection by monitoring the last lines of dmesg command using tail command: /dev/ttyusbx number will be used to configure the terminal emulator # dmesg grep tty Page 13 of 19

Open another terminal (CRTL+ATL+T) that will be dedicated to trace the SAMA5D3 DBGU serial port Open a serial terminal using picocom program with the required settings (115200 bauds, 8-N-1 with no hardware flow control): # picocom -b 115200 /dev/ttyusb0 Plug the 6-pin female connector of your cable on the J23 male from SAMA5D3 Xplained: The ground pin indicated on the silkscreen "GND" has to be connected with the black wire of the FTDI cable: GND (Black Wire) Demo programming progress can be now monitored on the SAMA5D3 DBGU serial port. It is also now possible to trace the different messages sent to the SAMA5D3 DBGU serial port by the Boot ROM and other applications such as u-boot, Linux Page 14 of 19

Program the Demo. If the /dev/ttyacmx previously chosen for SAM-BA is different from /dev/ttyacm0, edit the demo_linux_nandflash.sh file and modify /dev/ttyacmx device number accordingly: # gedit demo_linux_nandflash.sh Add execution rights to the script: # chmod a+x./demo_linux_nandflash.sh Execute the script to start demo programming: #./demo_linux_nandflash.sh When the logfile.log appears on the terminal (this will take a few minutes), check that === DONE. === is written at the end of the file: The demo that is programmed is based on Yocto 1.5. Monitor Demo Programming Progress using SAM-BA log file. It is possible to follow the progress of the demo programming, in case the user does not have a serial DBGU connection available to trace SAM-BA operations, by displaying the content of SAM-BA log file: Open another terminal (CRTL+ATL+T) that will be dedicated to display SAM-BA log file content Type the following commands to monitor SAM-BA log file: # cd ~/at91data/linux4sam-poky-sama5d3_xplained-4.3 # tail f logfile.log The demo is programmed. Page 15 of 19

Run the Demo. Press BP2 reset button to boot from the NAND Flash memory and run the demo If you do not have any serial DBGU debug connection (using for example a USB serial TTL adapter), you can get Linux Kernel debug information by opening a serial terminal on the USB connection (ttyacmx): Open a serial terminal using picocom program with the required settings (115200 bauds, 8-N-1 with no hardware flow control): # picocom -b 115200 /dev/ttyacm0 The demo has booted successfully. You should see the Linux sama5d3_xplained_login prompt: Page 16 of 19

6. Conclusion The hands-on taught you how to install and use SAM-BA to program one of the SAMA5D3 demos which is available on Linux4SAM ftp site. Same processes can be followed to program any other Linux demos hosted on Linux4SAM.org web site. Page 17 of 19

7. Revision History Doc. Rev. Date Comments 42328A 06/2014 Initial document release Page 18 of 19

Atmel Corporation 1600 Technology Drive San Jose, CA 95110 USA Tel: (+1)(408) 441-0311 Fax: (+1)(408) 487-2600 www.atmel.com Atmel Asia Limited Unit 01-5 & 16, 19F BEA Tower, Millennium City 5 418 Kwun Tong Road Kwun Tong, Kowloon HONG KONG Tel: (+852) 2245-6100 Fax: (+852) 2722-1369 Atmel Munich GmbH Business Campus Parkring 4 D-85748 Garching b. Munich GERMANY Tel: (+49) 89-31970-0 Fax: (+49) 89-3194621 Atmel Japan G.K. 16F Shin-Osaki Kangyo Bldg. 1-6-4 Osaki, Shinagawa-ku Tokyo 141-0032 JAPAN Tel: (+81)(3) 6417-0300 Fax: (+81)(3) 6417-0370 2014 Atmel Corporation. All rights reserved. / Rev.: 42328A 06/2014 Atmel, Atmel logo and combinations thereof, Enabling Unlimited Possibilities, SAM-BA, and others are registered trademarks or trademarks of Atmel Corporation in U.S. and other countries. ARM, ARM Connected logo, and others are the registered trademarks or trademarks of ARM Ltd. Windows is a registered trademark of Microsoft Corporation in U.S. and or other countries. Other terms and product names may be trademarks of others. Disclaimer: The information in this document is provided in connection with Atmel products. No license, express or implied, by estoppel or otherwise, to any intellectual property right is granted by this document or in connection with the sale of Atmel products. EXCEPT AS SET FORTH IN THE ATMEL TERMS AND CONDITIONS OF SALES LOCATED ON THE ATMEL WEBSITE, ATMEL ASSUMES NO LIABILITY WHATSOEVER AND DISCLAIMS ANY EXPRESS, IMPLIED OR STATUTORY WARRANTY RELATING TO ITS PRODUCTS INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTY OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, OR NON-INFRINGEMENT. IN NO EVENT SHALL ATMEL BE LIABLE FOR ANY DIRECT, INDIRECT, CONSEQUENTIAL, PUNITIVE, SPECIAL OR INCIDENTAL DAMAGES (INCLUDING, WITHOUT LIMITATION, DAMAGES FOR LOSS AND PROFITS, BUSINESS INTERRUPTION, OR LOSS OF INFORMATION) ARISING OUT OF THE USE OR INABILITY TO USE THIS DOCUMENT, EVEN IF ATMEL HAS BEEN ADVISED OF THE POSSIBILITY OF SUCH DAMAGES. Atmel makes no representations or warranties with respect to the accuracy or completeness of the contents of this document and reserves the right to make changes to specifications and products descriptions at any time without notice. Atmel does not make any commitment to update the information contained herein. Unless specifically provided otherwise, Atmel products are not suitable for, and shall not be used in, automotive applications. Atmel products are not intended, authorized, or warranted for use as components in applications intended to support or sustain life.