CURRICULUM VITAE PETROS KARVELIS

Transcription

1 CURRICULUM VITAE PETROS KARVELIS PERSONAL INFORMATION First Last Name Address Petros Karvelis D. Kotrotsou 10B, Stavraki, Ioannina, Greece EDUCATION BSc in Computer Science, Department of Computer Science, University of Ioannina BSc Thesis A study of convex polyhedron tetrahedralization algorithms. MSc in Computer Science, Department of Computer Science, University of Ioannina MSc Thesis Segmentation of human chromosome images. During my thesis we introduced a new algorithm for the segmentation of human chromosomes. We also introduced a new algorithm for the disentangling of touching and overlapping chromosomes. PhD, Department of Department of Computer Science, University of Ioannina. PhD thesis Processing and Analysing human chromosome images for the detection of chromosome abnormalities. During my thesis I have implemented many algorithms for the segmentation and classification of human chromosomes from multichannel as also from gray scale images. TECHNICAL KNOWLEDGE Generic- Scientific application development Microsoft.NET: C# VB.NET Windows Forms Java C Family: C - C++ Matlab WEKA (data mining software)

2 Academics Research Scientific Writing Algorithm design - analysis optimization Data structures / Information analysis / Information Retrieval Web application development PHP Javascript AJAX, front-end and rich UI technologies (jquery, Mootools) Web presentation layer technologies (xhtml, HTML, CSS) Web services DBMS (SQL Active Record ORM patterns) Relational: MySQL MSSQL Open source web software integration and customisation: CMS : Wordpress Wordpress MU Drupal Joomla : Plugins / Modules / Theme development Ecommerce: oscommerce, Prestashop, Magento : Plugins / Modules / Theme development Web / Internet PUBLICATIONS TO JOURNALS 1. P. Karvelis, D. Fotiadis, and I. Georgiou, A Multichannel Watershed-Based Segmentation Method for Multispectral Chromosome Classification, IEEE Transactions on Medical Imaging, vol. 27, no. 5, pp , P. Karvelis, D. Fotiadis, D. Tsalikakis and I. Georgiou, Enhancement of Multichannel Chromosome Classification Using a Region Based Classifier and Vector Median Filtering, IEEE Transactions on Information Technology in Biomedicine, vol. 13, no. 4, pp.: , P. Karvelis, A. Likas, D. Fotiadis Identifying touching and overlapping chromosomes using the watershed transform and gradient paths, Pattern Recognition Letters, vol. 3, no. 16, pp , P. Karvelis, A. Likas Fully Unsupervised M-FISH Chromosome Image Characterization, (accepted 2013). 5. A. Tzallas, P. Karvelis, C. Katsis, D. Fotiadis, S. Konitsiotis, S. Giannopoulos, An automated method for the classification of transient events in EEG recordings, Methods of Information in Medicine, vol. 45, no. 6, pp , Dec

3 6. M. Bourantas, M. Papafaklis, P. Karvelis, C. Katsouras, L. Michalis, Comparison of Quantitative Coronary Angiography (QCA) with Intracoronary Ultrasound (ICUS). Can QCA accurately estimate the severity of a luminal stenosis?, Angiology, vol. 60, pp , Apr L. Athanasiou, P. Karvelis, V. Tsakanikas, K. Naka, L. Michalis, C. Bourantas, and D. Fotiadis, A novel semi-automated atherosclerotic plaque characterization method using grayscale intravascular ultrasound images. Comparison with Virtual Histology, IEEE Transactions on Information Technology in Biomedicine, (accepted). 8. L. Athanasiou, P. Karvelis, T. Exarchos, V. Tsakanikas, K. Naka, L. Michalis, and D. Fotiadis, A hybrid plaque characterization method using intravascular ultrasound images, Computers in Biology and Medicine, (accepted). 9. N. Giannakeas, P. Karvelis,T. Exarchos, F. Kalatzis, D. Fotiadis, "Segmentation of Microarray Images Using Pixel Classification - Comparison with Clustering based Methods," Computers in Biology and Medicine, (accepted), PUBLICATIONS TO CONFERECNES 1. A. T. Tzallas, C. Katsis, P. Karvelis, D. Fotiadis, S. Konitsiotis and S. Giannopoulos, Classification Of Transients In EEG Recordings, Proceedings of the 2nd International Conference on Advances in Biomedical Signal and Information Processing, (MEDSIP 2004), Malta, 5-8 September A. T. Tzallas, C. Katsis, P. Karvelis, D. Fotiadis, S. Giannopoulos, S. Konitsiotis, Classification of Transient Events in EEG recordings using Support Vector Machines, Proceedings of the 3 rd European Medical & Biological Engineering Conference, (EMBEC 2005), pp , Prague, November P. S. Karvelis, D. I. Fotiadis, M. Syrrou, I. Georgiou, Segmentation of chromosomes images based on a recursive watershed transform, Proceedings of the 3 rd European Medical & Biological Engineering Conference, (EMBEC 2005), pp , Prague, November P. S. Karvelis, D. I. Fotiadis, I. Georgiou, and M. Syrrou, A Watershed Based Segmentation Method for Multispectral Chromosome Images Classification, Proceedings of the 28th IEEE EMBS Annual International Conference, (EMBS 2006), pp , New York City, USA, Aug 30-Sept 3, P. S. Karvelis, D. I. Fotiadis, Analysis of Cytogenetic Abnormalities using Multispectral Chromosome Images, International Special Topic on Information Technology in Biomedicine, (ITAB 2006), Oct 26-28, P.S. Karvelis, D.I. Fotiadis, A.T. Tzallas, and I. Georgiou, Region Based Segmentation and Classification of Multispectral Chromosome Images, 20th IEEE International Symposium on Computer-Based Medical Systems, (CBMS 2006), June 20-22, Maribor, pp , Karvelis, P.S., and Fotiadis, D.I., "Enhancement of Multispectral Chromosome

4 Image Classification Using Vector Median Filtering", 15th International Conference on Conceptual Structures (ICCS 2007), Sheffield, England, Lecture Notes in Computer Science, vol. xx, Springer -Verlag, pp. xx-xx, P. S. Karvelis, and D. I. Fotiadis, A region based decorrelation stretching method: application to multispectral chromosome image classification, IEEE International Conference on Image Processing, (ICIP 2008), San Diego, October 2008 (accepted). WORK EXPERIENCE 1/7/ /12/2003: Worked for EU Project INFACE: Intercommunication Security and Privacy (T5.1 WP5) Dissemination And Exploitation (T7.1, T7.2- WP7) proj. number IST , exact title : Advanced Visual InterFACEs for timely Retrieval of Patient Related Information (INFACE). 1/1/ /12/2004: Worked for EU Project NOESIS 63/1582/, Attentive Interfaces exact title: Platform for wide visual and representation of medical intelligence. 1/1/ /6/2005: Worked for EU Project NOESIS 63/1582/, Decision Support Framework Components exact title: Platform for wide visual and representation of medical intelligence. 1/11/ /12/2005: Worked for EU project Angiocare. 21/03/ /12/2006: Worked for Greek Project Open Source 1/9/ /12/2008: Worked for EU project ARTREAT. 1/1/ /12/2009: Worked for EU project ARTREAT. 1/1/ /12/2010: Worked for EU project ARTREAT. REVIEWER Reviewer IEEE 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Trans. on Medical Imaging IEEE Trans. on Information Technology in Biomedicine, Session Chairman IEEE CBMS RESEARCH INTERESTS

5 Digital Processing of Image/Signal Machine Learning Medical Informatics Bioinformatics Biomedical Engineering Algorithm design and implementation