Cat. # MK140. For Research Use. RetroNectin EIA Kit. Product Manual. v1011

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Cat. # MK140 For Research Use RetroNectin EIA Kit Product Manual

Table of Contents I. Description... 3 II. Principle... 3 III. Kit Components... 4 IV. Materials Required but not Provided... 4 V. Storage... 4 VI. Intended Use... 4 VII. Protocol... 4 VIII. Performance... 7 IX. Precautions for Use...12 X. Related products...12 2 URL:http://www.takara-bio.com

I. Description This kit is a sandwich ELISA using as the capture antibody a plate-coated RetroNectin -specific monoclonal antibody that does not cross-react with human fibronectin. It is not subject to inhibition even in the presence of human blood components, allowing easy monitoring of the level of RetroNectin. This kit allows highly sensitive quantitative determination of release from RetroNectin -coated plates and residual RetroNectin levels in both cryopreservation solutions of cells cultured in a RetroNectin -added medium and cell washings. RetroNectin (recombinant human fibronectin CH-296), a recombinant protein, is composed of 3 functional domains: human fibronectin cell-binding (C-domain), heparin-binding domain (H-domain) and CS-1 sequence. A combination of a recombinant retroviral vector and RetroNectin is frequently used for gene transfer into mammalian cells. This protocol, in which the RetroNectin molecule brings the retroviral vector that binds to the H-domain into close proximity with the animal cell that has an affinity for the C-domain, can dramatically increase transduction efficiency. In addition, RetroNectin has been used to aid lymphocyte expansion after it was shown to be an effective matrix for coating apparatuses used in ex vivo expansion of lymphocytes. II. Principle Substrate RetroNectin Labeled antibody POD Color development POD Antibody plate Sandwich complex Illustrative diagram of RetroNectin and fibronectin structures and RetroNectin -mediated gene transduction. Target Cell VLA-5(α 5 β 1 ) receptor VLA-4(α 4 β 1 ) Cell-binding domain (C-Domain;RGDS) Heparin-binding domain (H-Domain) CS-1 RetroNectin (CH-296) RGDS 8 9 10 CS-1 12 13 14 Fibronectin SH Cell RGDS Heparin CS-1 SH NH2 1 2 3 4 5 6 7 8 9 10 11 12 13 14 Fibrin Collagen DNA Cell Heparin Blue fonts: binding domains Heparin Cell (III CS) COOH S S Fibrin URL:http://www.takara-bio.com 3

III. Kit components (1) Antibody Coated Microtiter Plate Anti-RetroNectin monoclonal antibody plate, 1 plate (96 wells: 8 wells 12 strips) (2) Antibody-POD Conjugate Peroxidase-labeled anti-retronectin antibody (lyophilized) (3) Standard RetroNectin standard, 200 ng (lyophilized) for 11 ml for 1 ml (4) Sample Diluent 11 ml x 2 (5) Substrate Solution(TMBZ) 3,3,5,5 -tetramethyl benzidine solution 12 ml IV. Materials required but not provided 1. Reagents 2. Materials - Washing Buffer: Phosphate-buffered Saline (PBS) containing 0.1% Tween 20 (Dissolve 8.0 grams of NaCl, 0.2 grams of KCl, 2.9 grams of Na 2 HPO 4 12H 2 O and 0.2 grams of KH 2 PO 4 in 1000 ml of distilled water, and add 1 ml Tween 20.) Alternatively, a PBS tablet (Cat.#T900) is useful to prepare PBS solution. - Stop Solution: 1 N H 2 SO 4 - Precision pipettes with disposable tips: 100 µl micropipettes, 10-200 µl adjustable multiwell pipetter or 100 µl multiwell pipetters - Beakers, flasks, cylinders necessary for preparation of reagents - Disposable pipettes and test tubes - Microtiter plate reader (can assay absorptions up to 3.5 at 450 nm) V. Storage 4 VI. Intended Use Detect residual RetroNectin in frozen preserved cell suspensions transformed with RetroNectin and in cell washings. Detect residual RetroNectin in samples from lymphocyte expansion cultures that used RetroNectin. VII. Protocol 1. Sample Use cryopreservation or washing solution of cells cultured in RetroNectin -added medium as samples. Samples may be stored up to 12 hours at 4. If the assay will be performed longer than 12 hours after sample preparation, then store samples frozen at -20. Due to a matrix effect, antigens have a tendency to show a low value in sample solutions with a high protein level such as in blood. Therefore, it is recommended to assay concurrently the stock solution as well as dilutions of a sample. Prepare 2- to 8-fold serial dilutions using (4) Sample Diluent. 4 URL:http://www.takara-bio.com

Note: RetroNectin is a protein with a cell-binding domain. The presence of cell 2. Reagent preparation components may slightly affect the antigen-antibody reaction. When determining the residual RetroNectin after washing cells with RetroNectin, it is recommended to use surfactant Nonidet P-40 (CAS No.9016-45-9) for assaying the cells and washing buffer together by ELISA. - Prepare samples in the presence of Nonidet P-40 at a final concentration of 1%, or prepare assay samples by suspending cells in the (4) Sample Diluent containing Nonidet P-40 at 1%. Using up to 100 µl of a sample containing 1% Nonidet P-40 does not inhibit antigen-antibody reactions. (1) Antibody Coated Microtiter Plate Allow the unopened plate to reach room temperature in its package before use. POD-labeled Antibody Solution Reconstitute (2) Antibody - POD Conjugate with 11 ml of distilled water. Once reconstituted, it is stable for up to 1 week at 4. For longer storage, freeze at -20, at which it is stable for up to 1 month. However, no more than 1 cycle of freeze-thaw is allowed. RetroNectin Standard Solution Add 1 ml of distilled water to reconstitute (3) Standard, yielding a RetroNectin Standard Solution (200 ng/ml). Dilute with (4) Sample Diluent before use to prepare fresh serial dilutions (Standard Solutions at concentrations of 200, 100, 50, 25, 12.5, 6.25 and 3.125 ng/ml. Use (4) Sample Diluent as the 0-concentration standard. The RetroNectin Standard Solution (200 ng/ml) is stable for up to 1 week after preparation when stored at 4, or for up to 1 month at -20. Substrate solution Return the (5) Substrate Solution to room temperature before use. It is supplied ready to use in reactions. Check before use that it has not developed a dark blue color. A reaction with metal ions will result in coloration; make sure it is not contaminated with any tap water. If the Substrate Solution will be used for several reactions, divide it into aliquots of the required volume in advance. URL:http://www.takara-bio.com 5

3. Procedure Assay samples in duplicate. Return each reagent in the kit and samples to room temperature and make sure solutions are mixed uniformly without creating bubbles before use. 1. Prepare samples (100 µl/well) and the Standard Solution in a separate 96-well plate in advance so that they can be added to the antibody-plate quickly (within 5 minutes) using an 8-channel pipette or similar apparatus. In order to provide highly reliable results, it is recommended to place serial dilutions of the Standard Solution in the 1st and 12th rows. Add samples and Standard Solution to antibodyplate and let stand at room temperature (20-30 ) for 1 hour; incubation at 37 may compromise antigenicity. (First reaction) 2. Discard reaction mixtures, followed by 3 washes with Washing Buffer. Then add 100 µl of the POD-labeled antibody solution per well using an 8-channel pipette and allow to react for 1 hour at room temperature (20-30 ). (Second reaction) 3. Discard reaction mixtures, followed by 4 washes with Washing Buffer. Then add 100 µl of (5) Substrate Solution (TMBZ) per well using an 8-channel pipette and allow to react at room temperature (20-30 ) for 15 minutes. (Third reaction) 4. Add 100 µl of Stop Solution (1N H 2 SO 4 ) to each well to stop the reaction in the same order as for (5) Substrate Solution (TMBZ). Then mix well. 5. Use distilled water as a control to make zero adjustment and measure absorbance at 450 nm. The color is stable for up to 1 hour after reaction termination. 6. Plot a standard curve based on the results obtained from the Standard Solutions (with concentration as x-axis and absorbance as y-axis) and use it to determine the corresponding concentrations of RetroNectin based on the sample's absorbance. Note: Cover the plate with film or the like to prevent evaporation of solutions during reactions at room temperature or in an incubator. It is recommended that the Washing Buffer be completely discarded to get rid of the residual fluid. 6 URL:http://www.takara-bio.com

VIII. Performance 1. Standard curve (RetroNectin EIA Kit) The following is a typical standard curve. The standard curve for each lot is provided in the attached Certificate of Analysis. In order to obtain accurate results, it is preferable that a standard curve be plotted for each assay. Limit of detection: 3.125 ng/ml RetroNectin concentration (ng/ml) 2. Reproducibility 200 100 50 25 12.5 6.25 3.125 0.0 A 450 3.201 1.889 1.122 0.618 0.307 0.175 0.111 0.040 <Intra-assay reproducibility test (n = 16)> We conducted a within-run reproducibility test using controls at 3 different concentrations prepared by adding RetroNectin to human serum samples. Result: Excellent within-run reproducibility was confirmed with CV = no more than 5%. Sample (n = 16) Mean (ng/ml) SD CV(%) Control A Control B Control C 77.652 34.277 19.622 3.516 0.630 0.653 4.5 1.8 3.3 <Inter-assay precision test (n = 3)> A reproducibility test was performed by assaying 3 different concentrations of control over 3 days. Result: Excellent between-run reproducibility was demonstrated with CV = no more than 5%. Sample Mean (ng/ml) SD CV(%) Control A Control B Control C 72.756 32.996 18.516 3.339 1.240 0.787 4.9 1.9 3.4 URL:http://www.takara-bio.com 7

3. Recovery test Equal volume of samples in different concentrations were combined and assayed. The assay result of each mixture was compared with the theoretical value to determine the recovery rate. Sample A Sample B A+B/2 (theoretical value) A+B/2 (assay result) Recovery rate (%) 121.880 88.629 105.255 103.074 97.93 121.880 53.195 87.538 88.849 101.50 121.880 29.404 75.642 75.445 99.74 121.880 17.205 69.543 67.020 96.37 121.880 6.521 64.201 61.442 95.70 121.880 0.086 60.983 57.660 94.55 88.629 53.195 70.912 69.218 97.61 88.629 29.404 59.017 55.746 94.46 88.629 17.205 52.917 48.110 90.92 88.629 6.521 47.575 43.878 92.23 88.629 0.086 44.358 42.042 94.78 53.195 29.404 41.300 40.593 98.29 53.195 17.205 35.200 35.841 101.82 53.195 6.521 29.858 31.327 104.92 53.195 0.086 26.641 26.032 97.72 29.404 17.205 23.305 21.244 91.16 29.404 6.521 17.963 15.768 87.78 29.404 0.086 14.745 15.193 103.04 17.205 6.521 11.863 12.671 106.81 17.205 0.086 8.646 9.786 113.19 6.521 0.086 3.304 3.597 108.88 Unit: ng/ml 8 URL:http://www.takara-bio.com

(n=2) 4. Effects of freeze-thawing or heating of samples We studied the effects of freeze-thaws on the stability of Retronectin Standard added to human serum samples. Samples that had undergone repeated cycles of freeze-thaw and samples thawed for the first time were assayed using this kit. In addition, to study the effect of incubation at 37, samples were incubated at 37 for 1 to 2 hours before assay. Result: The effect of freeze-thaw was minimal, but incubation at 37 led to a slight decrease in the RetroNectin level. Freeze-thaw cycle Sample A Sample B Incubation at 37 Sample A Sample B 0 52.463 36.666 0 h 52.463 36.666 1 51.567 26.149 1 h 46.986 32.385 2 55.204 42.596 2 h 45.529 34.614 3 50.550 34.868 Unit : ng/ml 4 57.566 35.306 5 49.710 32.385 URL:http://www.takara-bio.com 9

5. Effects of coexisting substances Serum or plasma containing RetroNectin were combined with a test substance at a ratio of 9 to 1 to investigate the effect on RetroNectin measurement using this assay. Test substance concentrations are the final concentration. Result: Heparin and EDTA inhibit the immunoassay using this kit. 10 URL:http://www.takara-bio.com

6. Assay of RetroNectin in cryopreservation solution Cryopreservation solution was spiked with RetroNectin and then assayed. Cryopreservation solution constituents RPMI 1640 serum-free medium Human serum albumin (final concentration 8%) HES (Hydroxyethyl starch) DMSO (Dimethylsulfoxide) Saline High RetroNectin 2 µl of a 1 mg/ml stock RetroNectin solution was added to 1 ml of (4) Sample Diluent to make a concentration of 2,000 ng/ml. 10 µl of the diluted stock solution was then added to 90 µl of cryopreservation solution. (Theoretical concentration 200 ng/ml) Low RetroNectin 125 µl of diluted stock solution (2,000 ng/ml) was added to 875 µl of (4) Sample Diluent to make a concentration of 250 ng/ml. 10 µl of the 250-ng/ml diluted solution was then added to 90 µl of a preserved cell suspension. (Theoretical concentration 25 ng/ml) Result: Mearurements of RetroNectin in cryopreservation solution were around 90% of the theoretical concentration. Cryopreservation solution + High RetroNectin Cryopreservation solution + Low RetroNectin Measurement 177.589 ng/ml Theoretical concentration 200 ng/ml Recovery rate 88.8% Measurement 23.182 ng/ml Theoretical concentration 25 ng/ml Recovery rate 92.7% Recovery rate (%) = (theoretical concentration / measurement) 100 Note: RetroNectin is a functional protein that interacts with the cell surface and exhibits an affinity to heparin, an anticoagulant. The recovery rates were around 90% in the spike recovery test of cryopreservation solution. Recovery rates from blood samples (high-concentration plasma protein samples) spiked with RetroNectin may be less than 85% and unstable. URL:http://www.takara-bio.com 11

IX. Precautions for Use 1. Do not mix/use kits or reagents from different lots. 2. Do not expose reagents to strong light during storage or reactions. 3. Use pipettes free of metal when handling (5) Substrate Solution (TMBZ). 4. Avoid contact of (5) Substrate Solution (TMBZ) with hands or mucous membranes. 5. Do not use (5) Substrate Solution (TMBZ) that has developed color. 6. Each reaction varies subject to length of time and temperature. Therefore, a new standard curve must be generated for each assay. 7. Handle blood samples with great care as they are potentially infectious. X. Related products RetroNectin (Cat. #T100A/B) RetroNectin Dish (Cat. #T110A) pdon-ai-2 NEO DNA (Cat. #3653) pdon-ai-2 DNA (Cat. #3654) pmei-5 Neo DNA (Cat. #3655) pmei-5 DNA (Cat. #3656) pdon-5 Neo DNA (Cat. #3657) pdon-5 DNA (Cat. #3658) NOTE : This product is for research use only. It is not intended for use in therapeutic or diagnostic procedures for humans or animals. Also, do not use this product as food, cosmetic, or household item, etc. Takara products may not be resold or transferred, modified for resale or transfer, or used to manufacture commercial products without written approval from TAKARA BIO INC. If you require licenses for other use, please contact us by phone at +81 77 543 7247 or from our website at www.takara-bio.com. 12 URL:http://www.takara-bio.com