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Corporate Medical Policy Molecular Analysis for Targeted Therapy for Non-Small Cell Lung File Name: Origination: Last CAP Review: Next CAP Review: Last Review: molecular_analysis_for_targeted_therapy_for_non_small_cell_lung_cancer 4/12/11 8/2015 8/2016 8/2015 Description of Procedure or Service Treatment options for NSCLC depend on disease stage and include various combinations of surgery, radiation therapy, chemotherapy, and best supportive care. Unfortunately, in up to 85% of cases, the cancer has spread locally beyond the lungs at diagnosis, precluding surgical eradication. In addition, up to 40% of patients with NSCLC present with metastatic disease. When treated with standard platinum-based chemotherapy, patients with advanced NSCLC have a median survival of 8 to 11 months and a 1-year survival of 30% to 45%. More recently, the identification of specific, targetable oncogenic driver mutations in a subset of NSCLCs has resulted in a reclassification of lung tumors to include molecular subtypes, which are predominantly of adenocarcinoma histology. Testing for EGFR mutations in clinical decision making for the treatment of NSCLC is routine. The use of testing for other mutations to direct targeted therapy is not well established and continues to evolve. Epidermal Growth Factor Receptor (EGFR) Gene The EGFR, a receptor tyrosine kinase (TK), is frequently overexpressed and activated in NSCLC. Drugs that inhibit EGFR signaling either prevent ligand binding to the extracellular domain (monoclonal antibodies) or inhibit intracellular TK activity (small molecule TKIs). These targeted therapies dampen signal transduction through pathways downstream to the EGF receptor, such as the RAS/RAF/MAPK cascade. RAS proteins are G-proteins that cycle between active and inactive forms in response to stimulation from cell surface receptors such as EGFR, acting as binary switches between cell surface EGFR and downstream signaling pathways. These pathways are important in cancer cell proliferation, invasion, metastasis, and stimulation of neovascularization. Mutations in 2 regions of the EGFR gene (exons 18-24) small deletions in exon 19 and a point mutation in exon 21 (L858R) appear to predict tumor response to TKIs such as erlotinib. The prevalence of EGFR mutations in NSCLC varies by population, with the highest prevalence in nonsmoking Asian women, with adenocarcinoma, in whom EGFR mutations have been reported to be up to 30% to 50%. The reported prevalence in the white population is approximately 10%. ALK Gene ALK is a TK that, in NSCLC, is aberrantly activated because of a chromosomal rearrangement which leads to a fusion gene and expression of a protein with constitutive tyrosine kinase activity that has been demonstrated to play a role in controlling cell proliferation. The EML4-ALK fusion gene results from an inversion within the short arm of chromosome 2. The EML4-ALK rearrangement ( ALK-positive ) is detected in 3% to 6% of NSCLC patients, with the highest prevalence in never-smokers or light ex-smokers who have adenocarcinoma. Page 1 of 8

ROS Gene ROS1 codes for a receptor TK of the insulin receptor family, and chromosomal rearrangements result in fusion genes. The prevalence of ROS1 fusions in NSCLC varies from 0.9% to 3.7%.4 Patients with ROS1 fusions are typically never smokers with adenocarcinoma. RET Gene RET (rearranged during transfection) is a proto-oncogene that encodes a receptor TK growth factor. Translocations that result in fusion genes with several partners have been reported. RET fusions occur in 0.6% to 2% of NSCLCs and in 1.2% to 2% of adenocarcinomas. MET Gene MET amplification is one of the critical events for acquired resistance in EGFR-mutated adenocarcinomas refractory to EGFR-TKIs. BRAF Gene RAF proteins are serine/threonine kinases that are downstream of RAS in the RAS-RAF-ERK-MAPK pathway. In this pathway, the BRAF gene is the most frequently mutated in NSCLC, in approximately 1% to 3% of adenocarcinomas. Unlike melanoma, about 50% of the mutations in NSCLC are non-v600e mutations. Most BRAF mutations occur more frequently in smokers. Human Epidermal Growth Factor Receptor 2 (HER2) Gene Human epidermal growth factor receptor 2 (HER2) is a member of the HER (EGFR) family of TKreceptors and has no specific ligand. When activated, it forms dimers with other EGFR family members. HER2 is expressed in approximately 25% of NSCLC. HER2 mutations are detected mainly in exon 20 in 1% to 2% of NSCLC, predominantly in adenocarcinomas in nonsmoking women. Targeted Therapies Three orally administered EGFR-selective small molecule TKIs have been identified for use in treating NSCLC: gefitinib (Iressa, AstraZeneca), erlotinib (Tarceva, OSI Pharmaceuticals), and afatinib (Gilotrif, Boehringer Ingelheim). Only erlotinib and afatinib are approved by the U.S. Food and Drug Administration (FDA); although originally FDA approved, in 2004, a phase 3 trial suggested that gefitinib was not associated with a survival benefit. In May 2005. FDA revised gefitinib labeling further limiting its use to patients who had previously benefitted or were currently benefiting from the drug; no new patients were to be given gefitinib. Crizotinib is an oral small-molecule TKI which is FDA-approved for patients with locally advanced or metastatic NSCLC who are positive for the ALK gene rearrangement. Proposed targeted therapies for the remaining genetic alterations in NSCLC that are addressed in this policy are trastuzumab and afatinib for HER2 mutations, crizotinib for MET amplification, and ROS1 rearrangement, vemurafenib and dabrafenib for BRAF mutations and cabozantinib for RET rearrangements. Regulatory Status Erlotinib received initial FDA approval in 2004 for second-line treatment of patients with advanced NSCLC. In 2013, erlotinib indications were expanded to include first-line treatment of patients with metastatic NSCLC with EGFR exon 19 deletions or exon 21 (L858R) substitution mutations. A companion diagnostic test, the cobas EGFR Mutation Test, was coapproved for this indication. Afatinib was FDA-approved in July 2013 for first-line treatment of patients with metastatic NSCLC Page 2 of 8

with EGFR exon 19 deletions or L858R mutations. A companion diagnostic test, the therascreen EGFR Rotor-Gene Q polymerase chain reaction (RGQ PCR) kit, was coapproved for this indication. Both tests are polymerase chain reaction (PCR) assays. FDA-approved product labels for both erlotinib and afatinib indicate that EGFR mutations must be detected by an FDA-approved test but do not specify which test must be used. On August 26, 2011, based on 2 multicenter, single-arm trials, FDA granted accelerated approval to crizotinib (XALKORI Capsules, Pfizer) for the treatment of patients with locally advanced or metastatic NSCLC that is ALK-positive as detected by an FDA-approved test. FDA approved the Vysis ALK Break Apart fluorescence in situ hybridization (FISH) Probe Kit (Abbott Molecular) concurrently with the crizotinib approval. This companion diagnostic test is designed to detect rearrangements of the ALK gene in NSCLC and captures all ALK gene rearrangements. There are currently no alternative standard methods to the Vysis ALK Break Apart FISH Probe Kit assay for detecting ALK rearrangements in NSCLC. On November 20, 2013, crizotinib received full approval. Policy ***Note: This Medical Policy is complex and technical. For questions concerning the technical language and/or specific clinical indications for its use, please consult your physician. BCBSNC will provide coverage for molecular analysis for targeted therapy for non-small cell lung cancer when it is determined to be medically necessary because the medical criteria and guidelines shown below are met. Benefits Application This medical policy relates only to the services or supplies described herein. Please refer to the Member's Benefit Booklet for availability of benefits. Member's benefits may vary according to benefit design; therefore member benefit language should be reviewed before applying the terms of this medical policy. When Molecular Analysis for Targeted Therapy for Non-Small Cell Lung is covered Analysis of two types of somatic mutation within the EGFR gene, small deletions in exon 19 and a point mutation in exon 21 (L858R), may be considered medically necessary to predict treatment response to erlotinib or afatinib in patients with advanced lung adenocarcinoma or in whom an adenocarcinoma component cannot be excluded (see Policy Guidelines). Analysis of somatic rearrangement mutations of the ALK gene may be considered medically necessary to predict treatment response to crizotinib in patients with advanced lung adenocarcinoma or in whom an adenocarcinoma component cannot be excluded (see Policy Guidelines). When Molecular Analysis for Targeted Therapy for Non-Small Cell Lung is not covered Analysis of two types of somatic mutation within the EGFR gene, small deletions in exon 19 and a point mutation in exon 21 (L858R), is considered investigational for patients with advanced NSCLC of squamous cell-type. Analysis for other EGFR mutations within exons18-24, or other applications related to NSCLC, is considered investigational. Analysis of somatic rearrangement mutations of the ALK gene is considered investigational in all Page 3 of 8

other clinical situations. Analysis for genetic alterations in the genes ROS, RET, MET, BRAF and HER2, for targeted therapy in patients with NSCLC is considered investigational. Policy Guidelines These tests are intended for use in patients with advanced NSCLC. Patients with either small deletions in exon 19 or a point mutation in exon 21 (L858R) of the tyrosine kinase domain of the epidermal growth factor gene are considered good candidates for treatment with erlotinib or afatinib. Patients found to be wild type are unlikely to respond to erlotinib or afatinib; other treatment options should be considered. Current 2015 guidelines from the National Comprehensive Cancer Network recommend as a category 1 recommendation that EGFR mutation testing and ALK rearrangement testing be performed in the workup of NSCLC in patients with histologic subtypes adenocarcinoma, large cell carcinoma, and NSCLC not otherwise specified. 2014 guidelines issued jointly by the College of American Pathologists, International Association for the Study of Lung Cancer, and Association for Molecular Pathology recommend: EGFR mutation and ALK rearrangement testing in patients with lung adenocarcinoma regardless of clinical characteristics (eg, smoking history); In the setting of fully excised lung cancer specimens, EGFR and ALK testing is not recommended in lung cancers when an adenocarcinoma component is lacking (such as pure squamous cell lacking any immunohistochemical evidence of adenocarcinomatous differentiation); and In the setting of more limited lung cancer specimens (eg, biopsies, cytology) where an adenocarcinoma component cannot be completely excluded, EGFR and ALK testing may be performed in cases showing squamous cell histology. Clinical criteria (eg, young age, lack of smoking history) may be useful to select a subset of these samples for testing. ROS Gene Bergethon et al conducted a retrospective analysis of the clinical characteristics and treatment outcomes of patients with NSCLC with a ROS1 rearrangement.69 The authors screened 1073 patients from multiple institutions for ROS1 rearrangements using a FISH assay and correlated ROS1 status with clinical characteristics, OS, and when available, ALK rearrangement status. Clinical data were extracted from medical record review. In vitro studies with human NSCLC cell lines were also conducted to assess the responsiveness of cells with ROS1 rearrangements to crizotinib. Of the tumors that were screened, 18 (1.7%) had ROS1 rearrangements, and 31 (2.9%) had ALK rearrangements. All of the ROS1-positive tumors were adenocarcinomas. The patients with ROS1 rearrangements were significantly younger (median age, 49.8 years) and more likely to be never-smokers, when compared with the ROS1-negative group (each p<0.001). There was no survival difference observed between the ROS1-positive and negative groups. The in vitro studies showed evidence of sensitivity to crizotinib. Finally, the authors reported the clinical response of 1 patient in their study with a ROS1 rearrangement. The patient was enrolled as part of an expanded phase 1 cohort, in an open-label, multicenter trial of crizotinib. The patient had no EGFR mutation or ALK rearrangement. After treatment failure with erlotinib, the patient was treated with crizotinib and had near complete resolution of tumor without evidence of recurrence at 6 months. Kim et al reported clinical outcomes in 208 never-smokers with NSCLC adenocarcinoma, according to ROS1-rearrangement status.70 ALK rearrangements and EGFR mutations were concurrently analyzed. The patients had clinical stages ranging from I-IV, but most were stage IV (41.3%). Of the 208 tumors, 3.4% (n=7) were ROS1 rearranged. ROS1 rearrangement was mutually exclusive from ALK rearrangement, but 1 of 7 ROS1-positive patients had a concurrent EGFR mutation. Patients with ROS1 Page 4 of 8

rearrangement had a higher objective response rate and longer median PFS on pemetrexed than those without a rearrangement. In patients with ROS1 rearrangement, PFS with EGFR-TKIs was shorter than those patients without the rearrangement. None of the ROS1 positive patients received ALK inhibitors (eg, crizotinib), which is the proposed targeted therapy for patients with NSCLC and this genetic alteration. Over half of patients with non-small-cell lung cancer (NSCLC) present with advanced and therefore incurable disease, and treatment in this setting has generally been with platinum-based chemotherapy. More recently, the identification of specific, targetable oncogenic driver mutations in a subset of NSCLCs has resulted in a reclassification of lung tumors to include molecular subtypes, which are predominantly of adenocarcinoma histology. In NSCLC, the first successful example of targeted therapy involved mutations in the epidermal growth factor receptor (EGFR) gene, in which lung tumors harboring specific activating mutations in the EGFR kinase domain showed a high sensitivity to EGFR tyrosine kinase inhibitors (TKIs). Phase 3 studies comparing EGFR-TKIs to chemotherapy in patients with EGFR-mutated NSCLC have shown that TKIs are superior to chemotherapy in terms of tumor response rate and progression-free survival (PFS), with a reduction in toxicity and improvement in quality of life. Currently, routine testing of NSCLC for EGFR mutations is recommended in patients with advanced nonsquamous NSCLC, because TKIs are recommended if the tumor has an EGFR mutation. Phase 3 trials comparing crizotinib with chemotherapy in patients with anaplastic large-cell lymphoma kinase (ALK) positive, advanced nonsquamous NSCLC have shown that crizotinib is superior to chemotherapy in terms of tumor response rate and PFS and improvement in quality of life. Currently, routine testing of advanced, nonsquamous NSCLC for ALK rearrangements is recommended, because crizotinib is recommended if the tumor is ALK-positive. Other, potentially targetable oncogenic mutations have been characterized in lung adenocarcinomas, including in the genes ROS, RET, MET, BRAF, and HER2. The data on the use of targeted therapies in NSCLC with a mutation in one of these genes is preliminary, in that much of the demonstrated sensitivity of tumor to the various drugs has been in vitro or in animal studies, and published data on patient tumor response and survival outcomes are extremely limited, consisting of case reports and small case series. National Comprehensive Cancer Network Guidelines National Comprehensive Cancer Network (NCCN) guidelines for the treatment of NSCLC recommend the following: EGFR Gene EGFR mutation testing is recommended (category 1) in patients with non-squamous NSCLC (ie, adenocarcinoma, large cell carcinoma) or in NSCLC not otherwise specified, because erlotinib or afatinib (category 1 for both) is recommended for patients who are positive for EGFR mutations. Erlotinib is recommended as first-line therapy in patients with sensitizing EGFR mutations and should not be given as first-line therapy to patients negative for these EGFR mutations or with unknown EGFR status. Afatinib is recommended as first- or second-line therapy for select patients with sensitizing EGFR mutations. In patients with squamous cell carcinoma, EGFR mutation testing should be considered especially in never-smokers; when histology is assessed using small biopsy specimens (rather than surgically resected samples); or when histology is mixed adenosquamous. ALK Gene NCCN (v.4.2015) states that ALK rearrangement testing is recommended (category 1) in patients with Page 5 of 8

nonsquamous NSCLC (ie, adenocarcinoma, large cell carcinoma) or in NSCLC not otherwise specified, because crizotinib (category 1) is recommended for patients who are positive for ALK rearrangements. If ALK-positive status is discovered before first-line chemotherapy, give crizotinib (category 1), or if ALK rearrangement is discovered during first-line chemotherapy, interrupt or complete planned chemotherapy and start crizotinib. If there is progression on crizotinib, NCCN guidelines recommend multiple options (category 2A) including continuing crizotinib, switching to ceritinib, and considering local therapies depending on symptoms. Other Genes NCCN does not give specific recommendations for testing for genetic alterations in the genes ROS, RET, MET, BRAF, or HER2 in NSCLC, however, they state that the following targeted agents are now recommended for patients with specific genetic alterations: afatinib, cabozantinib, crizotinib, dabrafenib, erlotinib, gefitinib, trastuzumab, and vemurafenib (category 2A). Billing/Coding/Physician Documentation Information This policy may apply to the following codes. Inclusion of a code in this section does not guarantee that it will be reimbursed. For further information on reimbursement guidelines, please see Administrative Policies on the Blue Cross Blue Shield of North Carolina web site at www.bcbsnc.com. They are listed in the Category Search on the Medical Policy search page. Applicable service codes: G0452, 81235, 81275, 81403, 81405, 81406, 81479, 88363, S3713 BCBSNC may request medical records for determination of medical necessity. When medical records are requested, letters of support and/or explanation are often useful, but are not sufficient documentation unless all specific information needed to make a medical necessity determination is included. Scientific Background and Reference Sources BCBSA Medical Policy Reference Manual [Electronic Version]. 2.04.45, 1/13/2011 Medical Director 3/2011 Specialty Matched Consultant Advisory Panel 8/2011 BCBSA Medical Policy Reference Manual [Electronic Version]. 2.04.45, 1/12/2012 Specialty Matched Consultant Advisory Panel 8/2012 BCBSA Medical Policy Reference Manual [Electronic Version]. 2.04.45. 1/10/2013 Medical Director 2/2013 Specialty Matched Consultant Advisory Panel 8/2013 BCBSA Medical Policy Reference Manual [Electronic Version]. 2.04.45. 2/13/2014 Senior Medical Director 3/2014 Specialty Matched Consultant Advisory Panel- 8/2014 Page 6 of 8

BCBSA Medical Policy Reference Manual [Electronic Version]. 2.04.45. 9/11/2014 National Comprehensive Cancer Network. NCCN Clinical Practice Guidelines in Oncology: Non-Small Cell Lung Cancer, version 2.2014 (discussion update in progress). http://www.nccn.org/professionals/physician_gls/pdf/nscl.pdf. Accessed July, 2014. Senior Medical Director review 3/2015 BCBSA Medical Policy Reference Manual [Electronic Version]. 2.04.45. 3/12/2015 United States Food and Drug Administration (FDA), Available at: http://www.fda.gov/drugs/informationondrugs/approveddrugs/ucm279174.htm Specialty Matched Consultant Advisory Panel- 8/2015 Policy Implementation/Update Information Policy titled, Epidermal Growth Factor Receptor (EGFR) Mutation Analysis for Patients with Non Small Cell Lung 4/12/11 New policy. Medical Director review 3/23/11. Except as noted below, analysis of two types of somatic mutation within the EGFR gene small deletions in exon 19 and a point mutation in exon 21 (L858R) may be considered medically necessary to predict treatment response to erlotinib in patients with advanced NSCLC. Analysis of two types of somatic mutation within the EGFR gene small deletions in exon 19 and a point mutation in exon 21 (L858R) is considered investigational for patients with advanced NSCLC of squamous celltype. Analysis for other mutations within exons 18-24, or other applications related to NSCLC, is considered investigational. Notification given 4/12/2011. Policy effective 7/19/2011. (btw) 9/30/11 Specialty Matched Consultant Advisory Panel review 8/31/2011. No change to policy. (btw) 4/17/12 Reference added. (btw) 9/4/12 Specialty Matched Consultant Advisory Panel review 8/15/2012. No change to policy. Policy Guidelines section updated. (btw) 12/28/12 Added 81235 and G0452 to Billing/Coding section. Removed the following statement with deleted codes; This laboratory test would likely be coded using a series of nonspecific genetic testing codes. Providers may use a series of the following CPT codes: 83891, 83896, 83898, 83901, 83907, 83912, 88313, 88323, and/or 88381. (btw) 2/26/13 Updated policy guidelines. Reference added. Senior Medical Director review 2/8/2013. (btw) 9/11/13 Specialty Matched Consultant Advisory Panel review 8/21/2013. No change to policy. (btw) 11/26/13 Added of nonsquamous cell type to the When Covered statement. (btw) 4/15/14 Description section updated. Updated the When Covered section from Analysis of two types of somatic mutation within the EGFR gene small deletions in exon 19 and a point mutation in exon 21 (L858R) may be considered medically necessary to predict treatment Page 7 of 8

response to erlotinib in patients with advanced NSCLC of nonsquamous cell type. to Analysis of two types of somatic mutation within the EGFR gene small deletions in exon 19 and a point mutation in exon 21 (L858R) may be considered medically necessary to predict treatment response to erlotinib or afatinib in patients with advanced lung adenocarcinoma or in whom an adenocarcinoma component cannot be excluded (see Policy Guidelines section). Policy Guidelines updated to include information regarding afatinib. Senior Medical Director review 3/22/2014. Reference added. (btw) 9/9/14 Specialty matched consultant advisory panel review 8/26/2014. No change to policy statement. (lpr) Policy re-titled, Molecular Analysis for Targeted Therapy for Non Small Cell Lung Cancer 10/1/15 Policy retitled from Epidermal Growth Factor Receptor (EGFR) Mutation Analysis for Patients with Non-Small Cell Lung to Molecular Analysis for Targeted Therapy for Non-Small Cell Lung Cancer. Extensive revisions and updates to entire policy. Added KRAS information from previous evidence based guideline. Under When Not Covered section added investigational indications: Analysis of somatic mutations of the KRAS gene is considered investigational as a technique to predict treatment nonresponse to anti-egfr therapy with tyrosine-kinase inhibitors and for the use of the anti- EGFR monoclonal antibody cetuximab in NSCLC; Testing for genetic alterations in the genes ROS, RET, MET, BRAF and HER2, for targeted therapy in patients with NSCLC is considered investigational and Analysis of somatic rearrangement mutations of the ALK gene is considered investigational in all other clinical situations. Under When Covered section added medically necessary indication: Analysis of somatic rearrangement mutations of the ALK gene may be considered medically necessary to predict treatment response to crizotinib in patients with advanced lung adenocarcinoma or in whom an adenocarcinoma component cannot be excluded (see Policy Guidelines). Reference added. Specialty Matched Consultant Advisory Panel review 8/26/2015. Notification given 10/1/15 for effective date 12/30/15. (lpr) 12/30/15 KRAS information can now be found in Corporate Medical Policy KRAS, NRAS, and BRAF Mutation Analysis in Metastatic Colorectal Cancer. Removed references to KRAS in this medical policy. No change to policy statement or intent. (lpr) Medical policy is not an authorization, certification, explanation of benefits or a contract. Benefits and eligibility are determined before medical guidelines and payment guidelines are applied. Benefits are determined by the group contract and subscriber certificate that is in effect at the time services are rendered. This document is solely provided for informational purposes only and is based on research of current medical literature and review of common medical practices in the treatment and diagnosis of disease. Medical practices and knowledge are constantly changing and BCBSNC reserves the right to review and revise its medical policies periodically. Page 8 of 8