Cloud Computing for Research. Jeff Barr - January 2011
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1 Cloud Computing for Research Jeff Barr - January 2011
2 The Cloud is Suddenly Everywhere
3 Current Research Challenges There is never enough: Time Money CPU power Storage Physical space Power or cooling
4 How the Cloud Can Help Time Less time spent on system & infrastructure issues. More time for research. Money Economical, pay-as-you-go access to resources. AWS in Education program. CPU power As little or as much as you need ( cores and beyond). Storage GB, TB, PB on demand. Physical space No longer the final frontier. Power or cooling Our problem, not yours.
5 Amazon Web Services (AWS) Compute Elastic Compute Cloud (EC2) Auto Scaling + Elastic Load Balancing AWS Elastic Beanstalk Storage Simple Storage Service (S3) Elastic Block Storage (EBS) Database Relational Database Service (RDS) Amazon SimpleDB Third-Party offerings Messaging Simple Queue Service Simple Notification Service EC2 Instance 1 Application Tomcat Apache Amazon Linux Environment... Log Files (S3) Auto Scaling Elastic Load Balancer EC2 Instance N Application Tomcat Apache Amazon Linux
6 Memory (GB) $ / Hour US East Region Small 1.7 GB, 1 EC2 Compute Unit 1 virtual core Hi-Mem XL 17.1 GB 6.5 EC2 Compute Units 2 virtual cores Micro 613 MB Up to 2 ECUs (for short bursts) Hi-Mem 2XL 34.2 GB 13 EC2 Compute Units 4 virtual cores Hi-Mem 4XL 68.4 GB 26 EC2 Compute Units 8 virtual cores 2.00 Large 7.5 GB 4 EC2 Compute Units 2 virtual cores Extra Large 15 GB 8 EC2 Compute Units 4 virtual cores High-CPU Med 1.7 GB 5 EC2 Compute Units 2 virtual cores EC2 Compute Units (HP) High-CPU XL 7 GB 20 EC2 Compute Units 8 virtual cores Cluster Compute 4XL 23 GB 2 x Nehalem x EC2 Compute Units Cluster GPU 4XL 22 GB 2 x Nehalem x EC2 Compute Units, 2 x NVIDIA Tesla Fermi M2050 GPUs
7 AWS Management Console
8 AWS Security Certifications and Validations: SAS 70 Type II PCI DSS FISMA Low Security White Paper HIPAA White Paper Physical Security Military-grade perimeters Non-descript facilities 3+ levels of two-factor auth Data Security Redundant data storage SSH keys for EC2 access Stateful firewall / security groups Identity and Access Management (IAM) Multifactor Authentication
9 AWS Sample Pricing Micro server 24x7, 10 GB disk, 15 GB in, 15 GB out $0 (AWS Free Tier for new customers) Small server, 24x7, 100 GB Disk, 5 GB in, 5 GB out $97.12 / month Large server, 24x7, 250 GB Disk, 20 GB in, 20 GB out $ / month On-Demand $ / month + $ Year Reserved Instance 8 Cluster Compute for 24 hours, 1 GB in, 1 GB out $ On-Demand All prices in US East as of
10 AWS in Education Enable the worldwide academic community to easily leverage the benefits of Amazon Web Services for teaching and research. Teaching Grants for educators using AWS in courses (plus access to selected course content resources). Research Grants for academic researchers using AWS in their work. Project Grants for student organizations pursuing entrepreneurial endeavors; Tutorials for students that want to use AWS for selfdirected learning. Solutions for university administrators looking to use cloud computing to be more efficient and cost-effective in the university s IT Infrastructure.
11 AWS in Education Success Stories
12
13 Introducing MIT StarCluster Open source cluster Simplifies creation and management of EC2 clusters OpenMPI Oracle Grid Engine Launch a cluster of EC2 instances: One command ( starcluster ) to rule them all Passwordless SSH pre-configured Security group for SSH access Shared disk volume (NFS) Preinstalled libraries (NumPy, SciPy, etc.)
14 StarCluster Architecture / Terminology AWS Region Cluster Cluster Cluster Client EC2 or Desktop Running Linux Master EC2 Node001 EC2 NodeN EC2 Master Disk Config File
15 StarCluster Commands $ starcluster help $ starcluster start jb1 $ starcluster sshmaster jb1 $ starcluster listclusters <client>: starcluster listclusters StarCluster - ( Software Tools for Academics and Researchers (STAR) Please submit bug reports to starcluster@mit.edu jb1 (security Launch time: T05:43:44.000Z Zone: us-east-1c Keypair: keys-jbarr-us-east Cluster nodes: master running i-3fad6653 ec compute-1.amazonaws.com node001 running i-3bad6657 ec compute-1.amazonaws.com node002 running i-35ad6659 ec compute-1.amazonaws.com node003 running i-37ad665b ec compute-1.amazonaws.com node004 running i-31ad665d ec compute-1.amazonaws.com $ starcluster stop jb1
16 AWS - HPC Use Cases CFD Computational Fluid Dynamics OpenFOAM on EC2 CloudFlu Molecular Modeling Eli Lilly, Pfizer Sequence Analysis CloudBioLinux Engineering Design Energy Trading & Financial Modeling I/O-intensive Applications Graphics / 3D Rendering
17 AWS at the UW I m available for on-campus meetings on Wednesdays 10 Gbit connection to AWS via CENIC/PNW Gigapop
18 Getting Started AWS Home page: AWS in Education: AWS Security: AWS Blog: AWS Calculator: StarCluster: on Twitter
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