# Binary Diagnostic Tests Two Independent Samples

Save this PDF as:

Size: px
Start display at page:

## Transcription

1 Chapter 537 Binary Diagnostic Tests Two Independent Samples Introduction An important task in diagnostic medicine is to measure the accuracy of two diagnostic tests. This can be done by comparing summary measures of diagnostic accuracy such as sensitivity or specificity using a statistical test. Often, you want to show that a new test is similar to another test, in which case you use an equivalence test. Or, you may wish to show that a new diagnostic test is not inferior to the existing test, so you use a non-inferiority test. All of these hypothesis tests are available in this procedure for the important case when the diagnostic tests provide a binary (yes or no) result. The results of such studies can be displayed in two 2-by-2 tables in which the true condition is shown as the rows and the diagnostic test results are shown as the columns. Diagnostic Test 1 Result Diagnostic Test 2 Result True Condition Positive Negative Total Positive Negative Total Present (True) T11 T10 n11 T21 T20 n21 Absent (False) F11 F10 n10 F21 F20 n20 Total m11 m10 N1 m21 m20 N2 Data such as this can be analyzed using standard techniques for comparing two proportions which are presented in the chapter on Two Proportions. However, specialized techniques have been developed for dealing specifically with the questions that arise from such a study. These techniques are presented in chapter 5 of the book by Zhou, Obuchowski, and McClish (2002). Test Accuracy Several measures of a diagnostic test s accuracy are available. Probably the most popular measures are the test s sensitivity and the specificity. Sensitivity is the proportion of those that have the condition for which the diagnostic test is positive. Specificity is the proportion of those that do not have the condition for which the diagnostic test is negative. Other accuracy measures that have been proposed are the likelihood ratio and the odds ratio. Study designs anticipate that the sensitivity and specificity of the two tests will be compared

2 Comparing Sensitivity and Specificity Suppose you arrange the results of two diagnostic tests into two 2-by-2 tables as follows: Standard or Reference Treatment or Experimental Diagnostic Test 1 Result Diagnostic Test 2 Result True Condition Positive Negative Total Positive Negative Total Present (True) T11 T10 n11 T21 T20 n21 Absent (False) F11 F10 n10 F21 F20 n20 Total m11 m10 N1 m21 m20 N2 Hence, the study design include N = N1 + N2 patients. The hypotheses of interest when comparing the sensitivities (Se) of two diagnostic tests are either the difference hypotheses or the ratio hypothesis H : O Se 1 Se 2 = 0 versus H : A Se 1 Se 2 0 HO: Se1 / Se2 = 1 versus H A: Se1 / Se2 1 Similar sets of hypotheses may be defined for the difference or ratio of the specificities (Sp) as and H : O Sp 1 Sp 2 = 0 versus H : A Sp 1 Sp 2 0 H : O Sp 1/ Sp 2 = 1 versus H : A Sp 1/ Sp 2 1 Note that the difference hypotheses usually require a smaller sample size for comparable statistical power, but the ratio hypotheses may be more convenient. The sensitivities are estimated as and the specificities are estimated as T11 Se1 = and T21 Se2 = n11 n21 F10 Sp1 = and Sp2 = n10 The sensitivities and specificities of the two diagnostic test may be compared using either their difference or their ratio. As can be seen from the above, comparison of the sensitivity or the specificity reduces to the problem of comparing two independent binomial proportions. Hence the formulas used for hypothesis testing and confidence intervals are the same as presented in the chapter on testing two independent proportions. We refer you to that chapter for further details. F20 n20 Data Structure This procedure does not use data from a dataset. Instead, you enter the values directly into the panel. The data are entered into two tables. The table on the left represents the existing (standard) test. The table on the right contains the data for the new diagnostic test

3 Zero Cells Although zeroes are valid values, they make direct calculation of ratios difficult. One popular technique for dealing with the difficulties of zero values is to enter a small delta value such as 0.50 or 0.25 in the zero cells so that division by zero does not occur. Such method are controversial, but they are commonly used. Probably the safest method is to use the hypotheses in terms of the differences rather than ratios when zeroes occur, since these may be calculated without adding a delta. Procedure Options This section describes the options available in this procedure. Data Tab Enter the data values directly on this panel. Data Values T11 and T21 This is the number of patients that had the condition of interest and responded positively to the diagnostic test. The first character is the true condition: (T)rue or (F)alse. The second character is the test number: 1 or 2. The third character is the test result: 1=positive or 0=negative. The value entered must be a non-negative number. Many of the reports require the value to be greater than zero. T10 and T20 This is the number of patients that had the condition of interest but responded negatively to the diagnostic test. The first character is the true condition: (T)rue or (F)alse. The second character is the test number: 1 or 2. The third character is the test result: 1=positive or 0=negative. The value entered must be a non-negative number. Many of the reports require the value to be greater than zero. F11 and F21 This is the number of patients that did not have the condition of interest but responded positively to the diagnostic test. The first character is the true condition: (T)rue or (F)alse. The second character is the test number: 1 or 2. The third character is the test result: 1=positive or 0=negative. The value entered must be a non-negative number. Many of the reports require the value to be greater than zero. F10 and F20 This is the number of patients that did not have the condition of interest and responded positively to the diagnostic test. The first character is the true condition: (T)rue or (F)alse. The second character is the test number: 1 or 2. The third character is the test result: 1=positive or 0=negative. The value entered must be a non-negative number. Many of the reports require the value to be greater than zero. Confidence Interval Method Difference C.I. Method This option specifies the method used to calculate the confidence intervals of the proportion differences. These methods are documented in detail in the Two Proportions chapter. The recommended method is the skewnesscorrected score method of Gart and Nam

4 Ratio C.I. Method This option specifies the method used to calculate the confidence intervals of the proportion ratios. These methods are documented in detail in the Two Proportions chapter. The recommended method is the skewness-corrected score method of Gart and Nam. Report Options Alpha - Confidence Intervals The confidence coefficient to use for the confidence limits of the difference in proportions. 100 x (1 - alpha)% confidence limits will be calculated. This must be a value between 0 and 0.5. The most common choice is Alpha - Hypothesis Tests This is the significance level of the hypothesis tests, including the equivalence and noninferiority tests. Typical values are between 0.01 and The most common choice is Proportion Decimals The number of digits to the right of the decimal place to display when showing proportions on the reports. Probability Decimals The number of digits to the right of the decimal place to display when showing probabilities on the reports. Equivalence or Non-Inferiority Settings Max Equivalence Difference This is the largest value of the difference between the two proportions (sensitivity or specificity) that will still result in the conclusion of diagnostic equivalence. When running equivalence tests, this value is crucial since it defines the interval of equivalence. Usually, this value is between 0.01 and Note that this value must be a positive number. Max Equivalence Ratio This is the largest value of the ratio of the two proportions (sensitivity or specificity) that will still result in the conclusion of diagnostic equivalence. When running equivalence tests, this value is crucial since it defines the interval of equivalence. Usually, this value is between 1.05 and 2.0. Note that this value must be greater than one

5 Example 1 Binary Diagnostic Test of Two Independent Samples This section presents an example of how to enter data and run an analysis. In this example, samples of 50 individuals known to have a certain disease and 50 individuals without the disease where divided into two, equalsized groups. Half of each group was given diagnostic test 1 and the other half was given diagnostic test 2. The results are summarized into the following tables: Standard or Reference Treatment or Experimental Diagnostic Test 1 Result Diagnostic Test 2 Result True Condition Positive Negative Total Positive Negative Total Present (True) Absent (False) Total You may follow along here by making the appropriate entries or load the completed template Example 1 by clicking on Open Example Template from the File menu of the Binary Diagnostic Tests Two Independent Samples window. 1 Open the window. On the menus, select Analysis, then Proportions, then Binary Diagnostic Tests - Two Independent Samples. The procedure will be displayed. On the menus, select File, then New Template. This will fill the procedure with the default template. 2 Enter the data. Select the Data tab. In the T11 box, enter 20. In the T10 box, enter 5. In the F11 box, enter 7. In the F10 box, enter 18. In the T21 box, enter 21. In the T20 box, enter 4. In the F21 box, enter 5. In the F20 box, enter Set the other options. Set the Difference C.I. Method to Score w/skewness(gart-nam). Set the Ratio C.I. Method to Score w/skewness(gart-nam). Set the Max Equivalence Difference to Set the Max Equivalence Ratio to Run the procedure. From the Run menu, select Run Procedure. Alternatively, just click the green Run button

6 Data and Proportions Sections Counts for Test 1 Counts for Test 2 True Diagnostic Test Result Diagnostic Test Result Condition Positive Negative Total Positive Negative Total Present Absent Total Table Proportions for Test 1 Table Proportions for Test 2 True Diagnostic Test Result Diagnostic Test Result Condition Positive Negative Total Positive Negative Total Present Absent Total Row Proportions for Test 1 Row Proportions for Test 2 True Diagnostic Test Result Diagnostic Test Result Condition Positive Negative Total Positive Negative Total Present Absent Total Column Proportions for Test 1 Column Proportions for Test 2 True Diagnostic Test Result Diagnostic Test Result Condition Positive Negative Total Positive Negative Total Present Absent Total These reports display the counts that were entered for the two tables along with various proportions that make interpreting the table easier. Note that the sensitivity and specificity are displayed in the Row Proportions table. Sensitivity Confidence Intervals Section Lower 95.0% Upper 95.0% Statistic Test Value Conf. Limit Conf. Limit Sensitivity (Se1) Sensitivity (Se2) Difference (Se1-Se2) Ratio (Se1/Se2) Sensitivity: proportion of those that actually have the condition for which the diagnostic test is positive. This report displays the sensitivity for each test as well as corresponding confidence interval. It also shows the value and confidence interval for the difference and ratio of the sensitivity. Note that for a perfect diagnostic test, the sensitivity would be one. Hence, the larger the values the better. Also note that the type of confidence interval for the difference and ratio is specified on the Data panel. The Wilson score method is used to calculate the individual confidence intervals for the sensitivity of each test

7 Specificity Confidence Intervals Section Lower 95.0% Upper 95.0% Statistic Test Value Conf. Limit Conf. Limit Specificity (Sp1) Specificity (Sp2) Difference (Sp1-Sp2) Ratio (Sp1/Sp2) Specificity: proportion of those that do not have the condition for which the diagnostic test is negative. This report displays the specificity for each test as well as corresponding confidence interval. It also shows the value and confidence interval for the difference and ratio of the specificity. Note that for a perfect diagnostic test, the specificity would be one. Hence, the larger the values the better. Also note that the type of confidence interval for the difference and ratio is specified on the Data panel. The Wilson score method is used to calculate the individual confidence intervals for the specificity of each test. Sensitivity & Specificity Hypothesis Test Section Hypothesis Prob Decision at Test of Value Chi-Square Level 5.0% Level Se1 = Se Cannot Reject H0 Sp1 = Sp Cannot Reject H0 This report displays the results of hypothesis tests comparing the sensitivity and specificity of the two diagnostic tests. The Pearson chi-square test statistic and associated probability level is used. Likelihood Ratio Section Likelihood Ratio Section Lower 95.0% Upper 95.0% Statistic Test Value Conf. Limit Conf. Limit LR(Test=Posivitive) LR(Test=Negative) LR(Test = +) = P(Test = + True Condition = +) / P(Test = + True Condition = -). LR(Test = +) > 1 indicates a positive test is more likely among those in which True Condition = +. LR(Test = -): P(Test = - True Condition = +) / P(Test = - True Condition = -). LR(Test = -) < 1 indicates a negative test is more likely among those in which True = -. This report displays the positive and negative likelihood ratios with their corresponding confidence limits. You would want LR(+) > 1 and LR(-) < 1, so place close attention that the lower limit of LR(+) is greater than one and that the upper limit of LR(-) is less than one. Note the LR(+) means LR(Test=Positive). Similarly, LR(-) means LR(Test=Negative)

8 Odds Ratio Section Lower 95.0% Upper 95.0% Statistic Test Value Conf. Limit Conf. Limit Odds Ratio (+ 1/2) Odds Ratio (Fleiss) Odds Ratio = Odds(True Condition = +) / Odds(True Condition = -) where Odds(Condition) = P(Positive Test Condition) / P(Negative Test Condition) This report displays estimates of the odds ratio as well as its confidence interval. Because of the better coverage probabilities of the Fleiss confidence interval, we suggest that you use this interval. Hypothesis Tests of the Equivalence of Sensitivity Reject H0 Lower Upper and Conclude 90.0% 90.0% Lower Upper Equivalence Prob Conf. Conf. Equiv. Equiv. at the 5.0% Statistic Level Limit Limit Bound Bound Significance Level Diff. (Se1-Se2) Yes Ratio (Se1/Se2) No Equivalence is concluded when the confidence limits fall completely inside the equivalence bounds. This report displays the results of the equivalence tests of sensitivity, one based on the difference and the other based on the ratio. Equivalence is concluded if the confidence limits are inside the equivalence bounds. Prob Level The probability level is the smallest value of alpha that would result in rejection of the null hypothesis. It is interpreted as any other significance level. That is, reject the null hypothesis when this value is less than the desired significance level. Note that for many types of confidence limits, a closed form solution for this value does not exist and it must be searched for. Confidence Limits These are the lower and upper confidence limits calculated using the method you specified. Note that for equivalence tests, these intervals use twice the alpha. Hence, for a 5% equivalence test, the confidence coefficient is 0.90, not Lower and Upper Bounds These are the equivalence bounds. Values of the difference (ratio) inside these bounds are defined as being equivalent. Note that this value does not come from the data. Rather, you have to set it. These bounds are crucial to the equivalence test and they should be chosen carefully. Reject H0 and Conclude Equivalence at the 5% Significance Level This column gives the result of the equivalence test at the stated level of significance. Note that when you reject H0, you can conclude equivalence. However, when you do not reject H0, you cannot conclude nonequivalence. Instead, you conclude that there was not enough evidence in the study to reject the null hypothesis

9 Hypothesis Tests of the Equivalence of Specificity Reject H0 Lower Upper and Conclude 90.0% 90.0% Lower Upper Equivalence Prob Conf. Conf. Equiv. Equiv. at the 5.0% Statistic Level Limit Limit Bound Bound Significance Level Diff. (Sp1-Sp2) No Ratio (Sp1/ Sp2) No Equivalence is concluded when the confidence limits fall completely inside the equivalence bounds. This report displays the results of the equivalence tests of specificity, one based on the difference and the other based on the ratio. Report definitions are identical with those above for sensitivity. Hypothesis Tests of the Noninferiority of Sensitivity Reject H0 Lower Upper and Conclude 90.0% 90.0% Lower Upper Noninferiority Prob Conf. Conf. Equiv. Equiv. at the 5.0% Statistic Level Limit Limit Bound Bound Significance Level Diff. (Se1-Se2) Yes Ratio (Se1/Se2) Yes H0: The sensitivity of Test2 is inferior to Test1. Ha: The sensitivity of Test2 is noninferior to Test1. The noninferiority of Test2 compared to Test1 is concluded when the upper c.l. < upper bound. This report displays the results of two noninferiority tests of sensitivity, one based on the difference and the other based on the ratio. The noninferiority of test 2 as compared to test 1 is concluded if the upper confidence limit is less than the upper bound. The columns are as defined above for equivalence tests. Hypothesis Tests of the Noninferiority of Specificity Reject H0 Lower Upper and Conclude 90.0% 90.0% Lower Upper Noninferiority Prob Conf. Conf. Equiv. Equiv. at the 5.0% Statistic Level Limit Limit Bound Bound Significance Level Diff. (Sp1-Sp2) Yes Ratio (Sp1/Sp2) Yes H0: The specificity of Test2 is inferior to Test1. Ha: The specificity of Test2 is noninferior to Test1. The noninferiority of Test2 compared to Test1 is concluded when the upper c.l. < upper bound. This report displays the results of the noninferiority tests of specificity. Report definitions are identical with those above for sensitivity

### Two Correlated Proportions (McNemar Test)

Chapter 50 Two Correlated Proportions (Mcemar Test) Introduction This procedure computes confidence intervals and hypothesis tests for the comparison of the marginal frequencies of two factors (each with

### Non-Inferiority Tests for Two Proportions

Chapter 0 Non-Inferiority Tests for Two Proportions Introduction This module provides power analysis and sample size calculation for non-inferiority and superiority tests in twosample designs in which

### Tests for Two Proportions

Chapter 200 Tests for Two Proportions Introduction This module computes power and sample size for hypothesis tests of the difference, ratio, or odds ratio of two independent proportions. The test statistics

### PASS Sample Size Software

Chapter 250 Introduction The Chi-square test is often used to test whether sets of frequencies or proportions follow certain patterns. The two most common instances are tests of goodness of fit using multinomial

### NCSS Statistical Software Principal Components Regression. In ordinary least squares, the regression coefficients are estimated using the formula ( )

Chapter 340 Principal Components Regression Introduction is a technique for analyzing multiple regression data that suffer from multicollinearity. When multicollinearity occurs, least squares estimates

### Point Biserial Correlation Tests

Chapter 807 Point Biserial Correlation Tests Introduction The point biserial correlation coefficient (ρ in this chapter) is the product-moment correlation calculated between a continuous random variable

### Analysis of categorical data: Course quiz instructions for SPSS

Analysis of categorical data: Course quiz instructions for SPSS The dataset Please download the Online sales dataset from the Download pod in the Course quiz resources screen. The filename is smr_bus_acd_clo_quiz_online_250.xls.

### 11. Analysis of Case-control Studies Logistic Regression

Research methods II 113 11. Analysis of Case-control Studies Logistic Regression This chapter builds upon and further develops the concepts and strategies described in Ch.6 of Mother and Child Health:

### Tests for Two Survival Curves Using Cox s Proportional Hazards Model

Chapter 730 Tests for Two Survival Curves Using Cox s Proportional Hazards Model Introduction A clinical trial is often employed to test the equality of survival distributions of two treatment groups.

### Two-Sample T-Tests Assuming Equal Variance (Enter Means)

Chapter 4 Two-Sample T-Tests Assuming Equal Variance (Enter Means) Introduction This procedure provides sample size and power calculations for one- or two-sided two-sample t-tests when the variances of

### Three-Stage Phase II Clinical Trials

Chapter 130 Three-Stage Phase II Clinical Trials Introduction Phase II clinical trials determine whether a drug or regimen has sufficient activity against disease to warrant more extensive study and development.

### Standard Deviation Estimator

CSS.com Chapter 905 Standard Deviation Estimator Introduction Even though it is not of primary interest, an estimate of the standard deviation (SD) is needed when calculating the power or sample size of

### Tests for One Proportion

Chapter 100 Tests for One Proportion Introduction The One-Sample Proportion Test is used to assess whether a population proportion (P1) is significantly different from a hypothesized value (P0). This is

### NCSS Statistical Software

Chapter 06 Introduction This procedure provides several reports for the comparison of two distributions, including confidence intervals for the difference in means, two-sample t-tests, the z-test, the

### Pearson's Correlation Tests

Chapter 800 Pearson's Correlation Tests Introduction The correlation coefficient, ρ (rho), is a popular statistic for describing the strength of the relationship between two variables. The correlation

### Randomized Block Analysis of Variance

Chapter 565 Randomized Block Analysis of Variance Introduction This module analyzes a randomized block analysis of variance with up to two treatment factors and their interaction. It provides tables of

: Table of Contents... 1 Overview of Model... 1 Dispersion... 2 Parameterization... 3 Sigma-Restricted Model... 3 Overparameterized Model... 4 Reference Coding... 4 Model Summary (Summary Tab)... 5 Summary

### How to set the main menu of STATA to default factory settings standards

University of Pretoria Data analysis for evaluation studies Examples in STATA version 11 List of data sets b1.dta (To be created by students in class) fp1.xls (To be provided to students) fp1.txt (To be

### How to Conduct a Hypothesis Test

How to Conduct a Hypothesis Test The idea of hypothesis testing is relatively straightforward. In various studies we observe certain events. We must ask, is the event due to chance alone, or is there some

### Gamma Distribution Fitting

Chapter 552 Gamma Distribution Fitting Introduction This module fits the gamma probability distributions to a complete or censored set of individual or grouped data values. It outputs various statistics

### Standard Deviation Calculator

CSS.com Chapter 35 Standard Deviation Calculator Introduction The is a tool to calculate the standard deviation from the data, the standard error, the range, percentiles, the COV, confidence limits, or

### Comparables Sales Price

Chapter 486 Comparables Sales Price Introduction Appraisers often estimate the market value (current sales price) of a subject property from a group of comparable properties that have recently sold. Since

### Odds ratio, Odds ratio test for independence, chi-squared statistic.

Odds ratio, Odds ratio test for independence, chi-squared statistic. Announcements: Assignment 5 is live on webpage. Due Wed Aug 1 at 4:30pm. (9 days, 1 hour, 58.5 minutes ) Final exam is Aug 9. Review

### Confidence Intervals for Coefficient Alpha

Chapter 818 Confidence Intervals for Coefficient Alpha Introduction Coefficient alpha, or Cronbach s alpha, is a measure of the reliability of a test consisting of k parts. The k parts usually represent

### Introduction to Stata

Introduction to Stata September 23, 2014 Stata is one of a few statistical analysis programs that social scientists use. Stata is in the mid-range of how easy it is to use. Other options include SPSS,

### Non-Inferiority Tests for One Mean

Chapter 45 Non-Inferiority ests for One Mean Introduction his module computes power and sample size for non-inferiority tests in one-sample designs in which the outcome is distributed as a normal random

### Factors affecting online sales

Factors affecting online sales Table of contents Summary... 1 Research questions... 1 The dataset... 2 Descriptive statistics: The exploratory stage... 3 Confidence intervals... 4 Hypothesis tests... 4

### Regression Clustering

Chapter 449 Introduction This algorithm provides for clustering in the multiple regression setting in which you have a dependent variable Y and one or more independent variables, the X s. The algorithm

### NCSS Statistical Software

Chapter 06 Introduction This procedure provides several reports for the comparison of two distributions, including confidence intervals for the difference in means, two-sample t-tests, the z-test, the

### SAS Software to Fit the Generalized Linear Model

SAS Software to Fit the Generalized Linear Model Gordon Johnston, SAS Institute Inc., Cary, NC Abstract In recent years, the class of generalized linear models has gained popularity as a statistical modeling

### Confidence Intervals for Cpk

Chapter 297 Confidence Intervals for Cpk Introduction This routine calculates the sample size needed to obtain a specified width of a Cpk confidence interval at a stated confidence level. Cpk is a process

### Using Excel for inferential statistics

FACT SHEET Using Excel for inferential statistics Introduction When you collect data, you expect a certain amount of variation, just caused by chance. A wide variety of statistical tests can be applied

### Bill Burton Albert Einstein College of Medicine william.burton@einstein.yu.edu April 28, 2014 EERS: Managing the Tension Between Rigor and Resources 1

Bill Burton Albert Einstein College of Medicine william.burton@einstein.yu.edu April 28, 2014 EERS: Managing the Tension Between Rigor and Resources 1 Calculate counts, means, and standard deviations Produce

### Adverse Impact Ratio for Females (0/ 1) = 0 (5/ 17) = 0.2941 Adverse impact as defined by the 4/5ths rule was not found in the above data.

1 of 9 12/8/2014 12:57 PM (an On-Line Internet based application) Instructions: Please fill out the information into the form below. Once you have entered your data below, you may select the types of analysis

### Design and Analysis of Equivalence Clinical Trials Via the SAS System

Design and Analysis of Equivalence Clinical Trials Via the SAS System Pamela J. Atherton Skaff, Jeff A. Sloan, Mayo Clinic, Rochester, MN 55905 ABSTRACT An equivalence clinical trial typically is conducted

### Two-Sample T-Tests Allowing Unequal Variance (Enter Difference)

Chapter 45 Two-Sample T-Tests Allowing Unequal Variance (Enter Difference) Introduction This procedure provides sample size and power calculations for one- or two-sided two-sample t-tests when no assumption

### 9-3.4 Likelihood ratio test. Neyman-Pearson lemma

9-3.4 Likelihood ratio test Neyman-Pearson lemma 9-1 Hypothesis Testing 9-1.1 Statistical Hypotheses Statistical hypothesis testing and confidence interval estimation of parameters are the fundamental

### The Chi-Square Test. STAT E-50 Introduction to Statistics

STAT -50 Introduction to Statistics The Chi-Square Test The Chi-square test is a nonparametric test that is used to compare experimental results with theoretical models. That is, we will be comparing observed

### MINITAB ASSISTANT WHITE PAPER

MINITAB ASSISTANT WHITE PAPER This paper explains the research conducted by Minitab statisticians to develop the methods and data checks used in the Assistant in Minitab 17 Statistical Software. One-Way

### Confidence Intervals for Cp

Chapter 296 Confidence Intervals for Cp Introduction This routine calculates the sample size needed to obtain a specified width of a Cp confidence interval at a stated confidence level. Cp is a process

### Data Analysis Tools. Tools for Summarizing Data

Data Analysis Tools This section of the notes is meant to introduce you to many of the tools that are provided by Excel under the Tools/Data Analysis menu item. If your computer does not have that tool

### Appendix 2.1 Tabular and Graphical Methods Using Excel

Appendix 2.1 Tabular and Graphical Methods Using Excel 1 Appendix 2.1 Tabular and Graphical Methods Using Excel The instructions in this section begin by describing the entry of data into an Excel spreadsheet.

### LAB 4 INSTRUCTIONS CONFIDENCE INTERVALS AND HYPOTHESIS TESTING

LAB 4 INSTRUCTIONS CONFIDENCE INTERVALS AND HYPOTHESIS TESTING In this lab you will explore the concept of a confidence interval and hypothesis testing through a simulation problem in engineering setting.

### Introduction to. Hypothesis Testing CHAPTER LEARNING OBJECTIVES. 1 Identify the four steps of hypothesis testing.

Introduction to Hypothesis Testing CHAPTER 8 LEARNING OBJECTIVES After reading this chapter, you should be able to: 1 Identify the four steps of hypothesis testing. 2 Define null hypothesis, alternative

### Lin s Concordance Correlation Coefficient

NSS Statistical Software NSS.com hapter 30 Lin s oncordance orrelation oefficient Introduction This procedure calculates Lin s concordance correlation coefficient ( ) from a set of bivariate data. The

### Scatter Plots with Error Bars

Chapter 165 Scatter Plots with Error Bars Introduction The procedure extends the capability of the basic scatter plot by allowing you to plot the variability in Y and X corresponding to each point. Each

### Simple Linear Regression Inference

Simple Linear Regression Inference 1 Inference requirements The Normality assumption of the stochastic term e is needed for inference even if it is not a OLS requirement. Therefore we have: Interpretation

### SPSS: Expected frequencies, chi-squared test. In-depth example: Age groups and radio choices. Dealing with small frequencies.

SPSS: Expected frequencies, chi-squared test. In-depth example: Age groups and radio choices. Dealing with small frequencies. Quick Example: Handedness and Careers Last time we tested whether one nominal

Bowerman, O'Connell, Aitken Schermer, & Adcock, Business Statistics in Practice, Canadian edition Online Learning Centre Technology Step-by-Step - Excel Microsoft Excel is a spreadsheet software application

### Accounts Payable Expense Distribution Tables

Accounts Payable Expense Distribution Tables Use Expense Distribution Table Maintenance to set up tables with general ledger accounts and distribution percentages. The tables can then be selected in Invoice

### Simulating Chi-Square Test Using Excel

Simulating Chi-Square Test Using Excel Leslie Chandrakantha John Jay College of Criminal Justice of CUNY Mathematics and Computer Science Department 524 West 59 th Street, New York, NY 10019 lchandra@jjay.cuny.edu

### Non-Inferiority Tests for Two Means using Differences

Chapter 450 on-inferiority Tests for Two Means using Differences Introduction This procedure computes power and sample size for non-inferiority tests in two-sample designs in which the outcome is a continuous

### Tutorial Segmentation and Classification

MARKETING ENGINEERING FOR EXCEL TUTORIAL VERSION 1.0.8 Tutorial Segmentation and Classification Marketing Engineering for Excel is a Microsoft Excel add-in. The software runs from within Microsoft Excel

### Technology Step-by-Step Using StatCrunch

Technology Step-by-Step Using StatCrunch Section 1.3 Simple Random Sampling 1. Select Data, highlight Simulate Data, then highlight Discrete Uniform. 2. Fill in the following window with the appropriate

### 2 Precision-based sample size calculations

Statistics: An introduction to sample size calculations Rosie Cornish. 2006. 1 Introduction One crucial aspect of study design is deciding how big your sample should be. If you increase your sample size

### Confidence Intervals for Spearman s Rank Correlation

Chapter 808 Confidence Intervals for Spearman s Rank Correlation Introduction This routine calculates the sample size needed to obtain a specified width of Spearman s rank correlation coefficient confidence

### Regression Analysis: A Complete Example

Regression Analysis: A Complete Example This section works out an example that includes all the topics we have discussed so far in this chapter. A complete example of regression analysis. PhotoDisc, Inc./Getty

### Chris Slaughter, DrPH. GI Research Conference June 19, 2008

Chris Slaughter, DrPH Assistant Professor, Department of Biostatistics Vanderbilt University School of Medicine GI Research Conference June 19, 2008 Outline 1 2 3 Factors that Impact Power 4 5 6 Conclusions

### Generalized Linear Models

Generalized Linear Models We have previously worked with regression models where the response variable is quantitative and normally distributed. Now we turn our attention to two types of models where the

### Using Stata for Categorical Data Analysis

Using Stata for Categorical Data Analysis NOTE: These problems make extensive use of Nick Cox s tab_chi, which is actually a collection of routines, and Adrian Mander s ipf command. From within Stata,

### Multinomial and Ordinal Logistic Regression

Multinomial and Ordinal Logistic Regression ME104: Linear Regression Analysis Kenneth Benoit August 22, 2012 Regression with categorical dependent variables When the dependent variable is categorical,

### Below is a very brief tutorial on the basic capabilities of Excel. Refer to the Excel help files for more information.

Excel Tutorial Below is a very brief tutorial on the basic capabilities of Excel. Refer to the Excel help files for more information. Working with Data Entering and Formatting Data Before entering data

### Regression step-by-step using Microsoft Excel

Step 1: Regression step-by-step using Microsoft Excel Notes prepared by Pamela Peterson Drake, James Madison University Type the data into the spreadsheet The example used throughout this How to is a regression

### Overview What is a PivotTable? Benefits

Overview What is a PivotTable? Benefits Create a PivotTable Select Row & Column labels & Values Filtering & Sorting Calculations Data Details Refresh Data Design options Create a PivotChart Slicers Charts

### Factorial Analysis of Variance

Chapter 560 Factorial Analysis of Variance Introduction A common task in research is to compare the average response across levels of one or more factor variables. Examples of factor variables are income

### Improving the Performance of Data Mining Models with Data Preparation Using SAS Enterprise Miner Ricardo Galante, SAS Institute Brasil, São Paulo, SP

Improving the Performance of Data Mining Models with Data Preparation Using SAS Enterprise Miner Ricardo Galante, SAS Institute Brasil, São Paulo, SP ABSTRACT In data mining modelling, data preparation

MS Excel Handout: Level 2 elearning Department 2016 Page 1 of 11 Contents Excel Environment:... 3 To create a new blank workbook:...3 To insert text:...4 Cell addresses:...4 To save the workbook:... 5

### Stats for Strategy Fall 2012 First-Discussion Handout: Stats Using Calculators and MINITAB

Stats for Strategy Fall 2012 First-Discussion Handout: Stats Using Calculators and MINITAB DIRECTIONS: Welcome! Your TA will help you apply your Calculator and MINITAB to review Business Stats, and will

### Confidence Intervals for Exponential Reliability

Chapter 408 Confidence Intervals for Exponential Reliability Introduction This routine calculates the number of events needed to obtain a specified width of a confidence interval for the reliability (proportion

### Tutorial for proteome data analysis using the Perseus software platform

Tutorial for proteome data analysis using the Perseus software platform Laboratory of Mass Spectrometry, LNBio, CNPEM Tutorial version 1.0, January 2014. Note: This tutorial was written based on the information

### Tutorial #7A: LC Segmentation with Ratings-based Conjoint Data

Tutorial #7A: LC Segmentation with Ratings-based Conjoint Data This tutorial shows how to use the Latent GOLD Choice program when the scale type of the dependent variable corresponds to a Rating as opposed

### Two Related Samples t Test

Two Related Samples t Test In this example 1 students saw five pictures of attractive people and five pictures of unattractive people. For each picture, the students rated the friendliness of the person

### Data exploration with Microsoft Excel: analysing more than one variable

Data exploration with Microsoft Excel: analysing more than one variable Contents 1 Introduction... 1 2 Comparing different groups or different variables... 2 3 Exploring the association between categorical

### Unit 29 Chi-Square Goodness-of-Fit Test

Unit 29 Chi-Square Goodness-of-Fit Test Objectives: To perform the chi-square hypothesis test concerning proportions corresponding to more than two categories of a qualitative variable To perform the Bonferroni

### Instructions for data-entry and data-analysis using Epi Info

Instructions for data-entry and data-analysis using Epi Info After collecting data using the tools for evaluation and feedback available in the Hand Hygiene Implementation Toolkit (available at http://www.who.int/gpsc/5may/tools

### Microsoft Excel 2003

Microsoft Excel 2003 Data Analysis Larry F. Vint, Ph.D lvint@niu.edu 815-753-8053 Technical Advisory Group Customer Support Services Northern Illinois University 120 Swen Parson Hall DeKalb, IL 60115 Copyright

### How to Download Census Data from American Factfinder and Display it in ArcMap

How to Download Census Data from American Factfinder and Display it in ArcMap Factfinder provides census and ACS (American Community Survey) data that can be downloaded in a tabular format and joined with

### Statistics 305: Introduction to Biostatistical Methods for Health Sciences

Statistics 305: Introduction to Biostatistical Methods for Health Sciences Modelling the Log Odds Logistic Regression (Chap 20) Instructor: Liangliang Wang Statistics and Actuarial Science, Simon Fraser

### Extending Hypothesis Testing. p-values & confidence intervals

Extending Hypothesis Testing p-values & confidence intervals So far: how to state a question in the form of two hypotheses (null and alternative), how to assess the data, how to answer the question by

### IBM SPSS Direct Marketing 22

IBM SPSS Direct Marketing 22 Note Before using this information and the product it supports, read the information in Notices on page 25. Product Information This edition applies to version 22, release

### Psyc 250 Statistics & Experimental Design. Correlation Exercise

Psyc 250 Statistics & Experimental Design Correlation Exercise Preparation: Log onto Woodle and download the Class Data February 09 dataset and the associated Syntax to create scale scores Class Syntax

### XPost: Excel Workbooks for the Post-estimation Interpretation of Regression Models for Categorical Dependent Variables

XPost: Excel Workbooks for the Post-estimation Interpretation of Regression Models for Categorical Dependent Variables Contents Simon Cheng hscheng@indiana.edu php.indiana.edu/~hscheng/ J. Scott Long jslong@indiana.edu

### Stepwise Regression. Chapter 311. Introduction. Variable Selection Procedures. Forward (Step-Up) Selection

Chapter 311 Introduction Often, theory and experience give only general direction as to which of a pool of candidate variables (including transformed variables) should be included in the regression model.

### SPSS Explore procedure

SPSS Explore procedure One useful function in SPSS is the Explore procedure, which will produce histograms, boxplots, stem-and-leaf plots and extensive descriptive statistics. To run the Explore procedure,

### II. DISTRIBUTIONS distribution normal distribution. standard scores

Appendix D Basic Measurement And Statistics The following information was developed by Steven Rothke, PhD, Department of Psychology, Rehabilitation Institute of Chicago (RIC) and expanded by Mary F. Schmidt,

### Sample Size Planning, Calculation, and Justification

Sample Size Planning, Calculation, and Justification Theresa A Scott, MS Vanderbilt University Department of Biostatistics theresa.scott@vanderbilt.edu http://biostat.mc.vanderbilt.edu/theresascott Theresa

### 1. What is the critical value for this 95% confidence interval? CV = z.025 = invnorm(0.025) = 1.96

1 Final Review 2 Review 2.1 CI 1-propZint Scenario 1 A TV manufacturer claims in its warranty brochure that in the past not more than 10 percent of its TV sets needed any repair during the first two years

### Using Excel in Research. Hui Bian Office for Faculty Excellence

Using Excel in Research Hui Bian Office for Faculty Excellence Data entry in Excel Directly type information into the cells Enter data using Form Command: File > Options 2 Data entry in Excel Tool bar:

### Confidence Intervals for One Standard Deviation Using Standard Deviation

Chapter 640 Confidence Intervals for One Standard Deviation Using Standard Deviation Introduction This routine calculates the sample size necessary to achieve a specified interval width or distance from

### Guide to Microsoft Excel for calculations, statistics, and plotting data

Page 1/47 Guide to Microsoft Excel for calculations, statistics, and plotting data Topic Page A. Writing equations and text 2 1. Writing equations with mathematical operations 2 2. Writing equations with

### A POPULATION MEAN, CONFIDENCE INTERVALS AND HYPOTHESIS TESTING

CHAPTER 5. A POPULATION MEAN, CONFIDENCE INTERVALS AND HYPOTHESIS TESTING 5.1 Concepts When a number of animals or plots are exposed to a certain treatment, we usually estimate the effect of the treatment

### t Tests in Excel The Excel Statistical Master By Mark Harmon Copyright 2011 Mark Harmon

t-tests in Excel By Mark Harmon Copyright 2011 Mark Harmon No part of this publication may be reproduced or distributed without the express permission of the author. mark@excelmasterseries.com www.excelmasterseries.com

Chapter 11 Testing Hypotheses About Proportions Hypothesis testing method: uses data from a sample to judge whether or not a statement about a population may be true. Steps in Any Hypothesis Test 1. Determine

### Beginning Tutorials. PROC FREQ: It s More Than Counts Richard Severino, The Queen s Medical Center, Honolulu, HI OVERVIEW.

Paper 69-25 PROC FREQ: It s More Than Counts Richard Severino, The Queen s Medical Center, Honolulu, HI ABSTRACT The FREQ procedure can be used for more than just obtaining a simple frequency distribution

### Name: Date: Use the following to answer questions 3-4:

Name: Date: 1. Determine whether each of the following statements is true or false. A) The margin of error for a 95% confidence interval for the mean increases as the sample size increases. B) The margin

### CHAPTER 11. GOODNESS OF FIT AND CONTINGENCY TABLES

CHAPTER 11. GOODNESS OF FIT AND CONTINGENCY TABLES The chi-square distribution was discussed in Chapter 4. We now turn to some applications of this distribution. As previously discussed, chi-square is