GlassFish Server Open Source Edition

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1 GlassFish Server Open Source Edition Application Development Guide Release 4.0 May 2013 This Application Development Guide describes how to create and run Java Platform, Enterprise Edition (Java EE platform) applications that follow the open Java standards model for Java EE components and APIs in the GlassFish Server Open Source Edition environment. Topics include developer tools, security, and debugging. This book is intended for use by software developers who create, assemble, and deploy Java EE applications using Oracle servers and software.

2 GlassFish Server Open Source Edition Application Development Guide, Release 4.0 Copyright 2013, Oracle and/or its affiliates. All rights reserved. This software and related documentation are provided under a license agreement containing restrictions on use and disclosure and are protected by intellectual property laws. Except as expressly permitted in your license agreement or allowed by law, you may not use, copy, reproduce, translate, broadcast, modify, license, transmit, distribute, exhibit, perform, publish, or display any part, in any form, or by any means. Reverse engineering, disassembly, or decompilation of this software, unless required by law for interoperability, is prohibited. The information contained herein is subject to change without notice and is not warranted to be error-free. If you find any errors, please report them to us in writing. If this is software or related documentation that is delivered to the U.S. Government or anyone licensing it on behalf of the U.S. Government, the following notice is applicable: U.S. GOVERNMENT RIGHTS Programs, software, databases, and related documentation and technical data delivered to U.S. Government customers are "commercial computer software" or "commercial technical data" pursuant to the applicable Federal Acquisition Regulation and agency-specific supplemental regulations. As such, the use, duplication, disclosure, modification, and adaptation shall be subject to the restrictions and license terms set forth in the applicable Government contract, and, to the extent applicable by the terms of the Government contract, the additional rights set forth in FAR , Commercial Computer Software License (December 2007). Oracle America, Inc., 500 Oracle Parkway, Redwood City, CA This software or hardware is developed for general use in a variety of information management applications. It is not developed or intended for use in any inherently dangerous applications, including applications that may create a risk of personal injury. If you use this software or hardware in dangerous applications, then you shall be responsible to take all appropriate fail-safe, backup, redundancy, and other measures to ensure its safe use. Oracle Corporation and its affiliates disclaim any liability for any damages caused by use of this software or hardware in dangerous applications. Oracle and Java are registered trademarks of Oracle and/or its affiliates. Other names may be trademarks of their respective owners. Intel and Intel Xeon are trademarks or registered trademarks of Intel Corporation. All SPARC trademarks are used under license and are trademarks or registered trademarks of SPARC International, Inc. AMD, Opteron, the AMD logo, and the AMD Opteron logo are trademarks or registered trademarks of Advanced Micro Devices. UNIX is a registered trademark of The Open Group. This software or hardware and documentation may provide access to or information on content, products, and services from third parties. Oracle Corporation and its affiliates are not responsible for and expressly disclaim all warranties of any kind with respect to third-party content, products, and services. Oracle Corporation and its affiliates will not be responsible for any loss, costs, or damages incurred due to your access to or use of third-party content, products, or services.

3 Contents Preface... xv Part I Development Tasks and Tools 1 Setting Up a Development Environment Installing and Preparing the Server for Development High Availability Features Development Tools The asadmin Command The Administration Console The Migration Tool The NetBeans IDE The Eclipse IDE Debugging Tools Profiling Tools Sample Applications Class Loaders The Class Loader Hierarchy Delegation Using the Java Optional Package Mechanism Using the Endorsed Standards Override Mechanism Class Loader Universes Application-Specific Class Loading Circumventing Class Loader Isolation Using the Common Class Loader Sharing Libraries Across a Cluster Packaging the Client JAR for One Application in Another Application To Package the Client JAR for One Application in Another Application Debugging Applications Enabling Debugging To Set the Server to Automatically Start Up in Debug Mode JPDA Options Generating a Stack Trace for Debugging iii

4 Application Client Debugging Open Message Queue Debugging Enabling Verbose Mode Class Loader Debugging GlassFish Server Logging Profiling Tools The NetBeans Profiler The HPROF Profiler The JProbe Profiler Part II Developing Applications and Application Components 4 Securing Applications Security Goals GlassFish Server Specific Security Features Container Security Declarative Security Programmatic Security Roles, Principals, and Principal to Role Mapping Realm Configuration Supported Realms How to Configure a Realm How to Set a Realm for an Application or Module Creating a Custom Realm JACC Support Pluggable Audit Module Support Configuring an Audit Module The AuditModule Class The server.policy File Default Permissions System Properties Changing Permissions for an Application Enabling and Disabling the Security Manager Configuring Message Security for Web Services Message Security Providers Message Security Responsibilities Application-Specific Message Protection Understanding and Running the Sample Application Programmatic Login Programmatic Login Precautions Granting Programmatic Login Permission The ProgrammaticLogin Class User Authentication for Single Sign-on Adding Authentication Mechanisms to the Servlet Container The GlassFish Server and JSR Writing a Server Authentication Module Sample Server Authentication Module iv

5 Compiling and Installing a Server Authentication Module Configuring a Server Authentication Module Binding a Server Authentication Module to Your Application Developing Web Services Creating Portable Web Service Artifacts Deploying a Web Service The Web Service URI, WSDL File, and Test Page The Databinding Provider GlassFish Java EE Service Engine Using the jbi.xml File Configuring the Java Persistence Provider Overview of Oracle TopLink Using Oracle TopLink in GlassFish Server Specifying the Database for an Application Specifying the Persistence Provider for an Application Primary Key Generation Defaults Automatic Schema Generation Annotations Generation Options Restrictions and Optimizations Oracle Database Enhancements Extended Persistence Context with a Shared Session Cache Using BLOB or CLOB Types with the Inet Oraxo JDBC Driver Database Case Sensitivity Sybase Finder Limitation MySQL Database Restrictions Developing Web Applications Using Servlets Caching Servlet Results About the Servlet Engine Using JavaServer Pages JSP Tag Libraries and Standard Portable Tags JSP Caching Options for Compiling JSP Files Creating and Managing Sessions Configuring Sessions Session Managers Using Comet Introduction to Comet Grizzly Comet Bayeux Protocol Advanced Web Application Features v

6 Internationalization Issues Virtual Server Properties Class Loader Delegation Using the default-web.xml File Configuring Logging and Monitoring in the Web Container Configuring Idempotent URL Requests Header Management Configuring Valves and Catalina Listeners Alternate Document Roots Using a context.xml File Enabling WebDav Using SSI Using CGI Using Enterprise JavaBeans Technology Value Added Features Read-Only Beans The pass-by-reference Element Pooling and Caching Priority Based Scheduling of Remote Bean Invocations Immediate Flushing EJB Timer Service To Deploy an EJB Timer to a Cluster Using Session Beans About the Session Bean Containers Stateful Session Bean Failover Session Bean Restrictions and Optimizations Using Read-Only Beans Read-Only Bean Characteristics and Life Cycle Read-Only Bean Good Practices Refreshing Read-Only Beans Deploying Read-Only Beans Using Message-Driven Beans Message-Driven Bean Configuration Message-Driven Bean Restrictions and Optimizations Using Container-Managed Persistence GlassFish Server Support for CMP CMP Mapping Mapping Capabilities The Mapping Deployment Descriptor File Mapping Considerations Automatic Schema Generation for CMP Supported Data Types for CMP Generation Options for CMP Schema Capture Automatic Database Schema Capture vi

7 Using the capture-schema Utility Configuring the CMP Resource Performance-Related Features Version Column Consistency Checking Relationship Prefetching Read-Only Beans Default Fetch Group Flags Configuring Queries for 1.1 Finders About JDOQL Queries Query Filter Expression Query Parameters Query Variables JDOQL Examples CMP Restrictions and Optimizations Disabling ORDER BY Validation Setting the Heap Size on DB Eager Loading of Field State Restrictions on Remote Interfaces PostgreSQL Case Insensitivity No Support for lock-when-loaded on Sybase Sybase Finder Limitation Date and Time Fields Set RECURSIVE_TRIGGERS to false on MSSQL MySQL Database Restrictions Developing Java Clients Introducing the Application Client Container ACC Security ACC Naming Application Client Annotation Java Web Start Application Client JAR File Developing Clients Using the ACC To Access an EJB Component From an Application Client To Access a JMS Resource From an Application Client Using Java Web Start Using the Embeddable ACC Running an Application Client Using the appclient Script Using the package-appclient Script The client.policy File Using RMI/IIOP Over SSL Connecting to a Remote EJB Module Through a Firewall Specifying a Splash Screen Setting Login Retries Using Libraries with Application Clients Developing Clients Without the ACC To access an EJB component from a stand-alone client vii

8 To access an EJB component from a server-side module To access a JMS resource from a stand-alone client Developing Connectors Connector Support in the GlassFish Server Connector Architecture for JMS and JDBC Connector Configuration Advanced Connector Configuration Options Thread Associations Security Maps Work Security Maps Overriding Configuration Properties Testing a Connector Connection Pool Flushing a Connector Connection Pool Handling Invalid Connections Setting the Shutdown Timeout Specifying the Class Loading Policy Using Last Agent Optimization of Transactions Disabling Pooling for a Connection Using Application-Scoped Connectors Inbound Communication Support Outbound Communication Support Configuring a Message Driven Bean to Use a Resource Adapter Developing Lifecycle Listeners Server Life Cycle Events The LifecycleListener Interface The LifecycleEvent Class The Server Lifecycle Event Context Deploying a Lifecycle Module Considerations for Lifecycle Modules Developing OSGi-enabled Java EE Applications Overview of OSGi Application and GlassFish Server Benefits of Using OSGi in Enterprise Java Applications Developing OSGi Application Bundles for GlassFish Server Developing Plain OSGi Bundles Developing Web Application Bundles Developing EJB Application Bundles Deploying OSGi Bundles in GlassFish Server Part III Using Services and APIs 14 Using the JDBC API for Database Access Statements Using an Initialization Statement viii

9 Setting a Statement Timeout Statement Leak Detection and Leaked Statement Reclamation Statement Caching Statement Tracing Connections Transparent Pool Reconfiguration Disabling Pooling Associating Connections with Threads Custom Connection Validation Sharing Connections Marking Bad Connections Handling Invalid Connections Connection Wrapping Wrapping Connections Obtaining a Physical Connection From a Wrapped Connection Using the Connection.unwrap() Method Allowing Non-Component Callers Using Application-Scoped Resources Restrictions and Optimizations Disabling Stored Procedure Creation on Sybase Using the Transaction Service Handling Transactions with Databases Using JDBC Transaction Isolation Levels Using Non-Transactional Connections Handling Transactions with Enterprise Beans Flat Transactions Global and Local Transactions Commit Options Bean-Level Container-Managed Transaction Timeouts Handling Transactions with the Java Message Service Transactions and Non-Persistent Messages Using the ConfigurableTransactionSupport Interface The Transaction Manager, the Transaction Synchronization Registry, and UserTransaction Using the Java Naming and Directory Interface Accessing the Naming Context Portable Global JNDI Names GlassFish Server V2 Vendor-Specific Global JNDI Names Disabling GlassFish Server V2 JNDI Names Accessing EJB Components Using the CosNaming Naming Context Accessing EJB Components in a Remote GlassFish Server Naming Environment for Lifecycle Modules Configuring Resources External JNDI Resources Custom Resources ix

10 Built-in Factories for Custom Resources Using Application-Scoped Resources Using a Custom jndi.properties File Mapping References Using the Java Message Service Using Application-Scoped JMS Resources Load-Balanced Message Inflow Authentication With ConnectionFactory Delivering SOAP Messages Using the JMS API To Send SOAP Messages Using the JMS API To Receive SOAP Messages Using the JMS API Using the JavaMail API Introducing JavaMail Creating a JavaMail Session JavaMail Session Properties Looking Up a JavaMail Session Sending and Reading Messages Using JavaMail To Send a Message Using JavaMail To Read a Message Using JavaMail Using Application-Scoped JavaMail Resources x

11 xi

12 List of Examples 13 1 Example of a WAB Using CDI xii

13 List of Figures xiii

14 List of Tables 2 1 Oracle GlassFish Server Class Loaders Predefined System Properties Message Security Provider Properties The asadmin deploy and asadmin deploydir Generation Options The asadmin undeploy Generation Options The cache Attributes The flush Attributes Object Types Supported for Java EE Web Application Session State Failover SSIServlet init-param Values CGIServlet init-param Values Object Types Supported for Java EE Stateful Session Bean State Failover Java Type to JDBC Type Mappings for CMP Mappings of JDBC Types to Database Vendor Specific Types for CMP The glassfish-ejb-jar.xml Generation Elements The asadmin deploy and asadmin deploydir Generation Options for CMP The asadmin undeploy Generation Options for CMP Owned JNLP File Content Defaulted JNLP File Content Merged JNLP File Content Transaction Isolation Levels xiv

15 Preface This Application Development Guide describes how to create and run Java Platform, Enterprise Edition (Java EE platform) applications that follow the open Java standards model for Java EE components and APIs in the Oracle GlassFish Server environment. Topics include developer tools, security, and debugging. This book is intended for use by software developers who create, assemble, and deploy Java EE applications using Oracle servers and software. This preface contains information about and conventions for the entire GlassFish Server Open Source Edition (GlassFish Server) documentation set. GlassFish Server 4.0 is developed through the GlassFish project open-source community at The GlassFish project provides a structured process for developing the GlassFish Server platform that makes the new features of the Java EE platform available faster, while maintaining the most important feature of Java EE: compatibility. It enables Java developers to access the GlassFish Server source code and to contribute to the development of the GlassFish Server. The GlassFish project is designed to encourage communication between Oracle engineers and the community. The following topics are addressed here: GlassFish Server Documentation Set Related Documentation Typographic Conventions Symbol Conventions Default Paths and File Names Documentation, Support, and Training Searching Oracle Product Documentation Documentation Accessibility GlassFish Server Documentation Set The GlassFish Server documentation set describes deployment planning and system installation. For an introduction to GlassFish Server, refer to the books in the order in which they are listed in the following table. xv

16 Book Title Release Notes Quick Start Guide Installation Guide Upgrade Guide Deployment Planning Guide Administration Guide Security Guide Application Deployment Guide Application Development Guide Embedded Server Guide High Availability Administration Guide Performance Tuning Guide Troubleshooting Guide Error Message Reference Reference Manual Message Queue Release Notes Message Queue Technical Overview Message Queue Administration Guide Description Provides late-breaking information about the software and the documentation and includes a comprehensive, table-based summary of the supported hardware, operating system, Java Development Kit (JDK), and database drivers. Explains how to get started with the GlassFish Server product. Explains how to install the software and its components. Explains how to upgrade to the latest version of GlassFish Server. This guide also describes differences between adjacent product releases and configuration options that can result in incompatibility with the product specifications. Explains how to build a production deployment of GlassFish Server that meets the requirements of your system and enterprise. Explains how to configure, monitor, and manage GlassFish Server subsystems and components from the command line by using the asadmin utility. Instructions for performing these tasks from the Administration Console are provided in the Administration Console online help. Provides instructions for configuring and administering GlassFish Server security. Explains how to assemble and deploy applications to the GlassFish Server and provides information about deployment descriptors. Explains how to create and implement Java Platform, Enterprise Edition (Java EE platform) applications that are intended to run on the GlassFish Server. These applications follow the open Java standards model for Java EE components and application programmer interfaces (APIs). This guide provides information about developer tools, security, and debugging. Explains how to run applications in embedded GlassFish Server and to develop applications in which GlassFish Server is embedded. Explains how to configure GlassFish Server to provide higher availability and scalability through failover and load balancing. Explains how to optimize the performance of GlassFish Server. Describes common problems that you might encounter when using GlassFish Server and explains how to solve them. Describes error messages that you might encounter when using GlassFish Server. Provides reference information in man page format for GlassFish Server administration commands, utility commands, and related concepts. Describes new features, compatibility issues, and existing bugs for Open Message Queue. Provides an introduction to the technology, concepts, architecture, capabilities, and features of the Message Queue messaging service. Explains how to set up and manage a Message Queue messaging system. xvi

17 Book Title Message Queue Developer's Guide for JMX Clients Message Queue Developer's Guide for Java Clients Message Queue Developer's Guide for C Clients Description Describes the application programming interface in Message Queue for programmatically configuring and monitoring Message Queue resources in conformance with the Java Management Extensions (JMX). Provides information about concepts and procedures for developing Java messaging applications (Java clients) that work with GlassFish Server. Provides programming and reference information for developers working with Message Queue who want to use the C language binding to the Message Queue messaging service to send, receive, and process Message Queue messages. Related Documentation The following tutorials explain how to develop Java EE applications: Your First Cup: An Introduction to the Java EE Platform ( For beginning Java EE programmers, this short tutorial explains the entire process for developing a simple enterprise application. The sample application is a web application that consists of a component that is based on the Enterprise JavaBeans specification, a JAX-RS web service, and a JavaServer Faces component for the web front end. The Java EE 7 Tutorial ( This comprehensive tutorial explains how to use Java EE 7 platform technologies and APIs to develop Java EE applications. Javadoc tool reference documentation for packages that are provided with GlassFish Server is available as follows. The API specification for version 7 of Java EE is located at The API specification for GlassFish Server 4.0, including Java EE 7 platform packages and nonplatform packages that are specific to the GlassFish Server product, is located at Additionally, the Java EE Specifications ( might be useful. For information about creating enterprise applications in the NetBeans Integrated Development Environment (IDE), see the NetBeans Documentation, Training & Support page ( For information about the Java DB database for use with the GlassFish Server, see the Java DB product page ( ml). The Java EE Samples project is a collection of sample applications that demonstrate a broad range of Java EE technologies. The Java EE Samples are bundled with the Java EE Software Development Kit (SDK) and are also available from the Java EE Samples project page ( xvii

18 Typographic Conventions The following table describes the typographic changes that are used in this book. Typeface Meaning Example AaBbCc123 The names of commands, files, and directories, and onscreen computer output AaBbCc123 What you type, contrasted with onscreen computer output AaBbCc123 AaBbCc123 A placeholder to be replaced with a real name or value Book titles, new terms, and terms to be emphasized (note that some emphasized items appear bold online) Edit your.login file. Use ls a to list all files. machine_name% you have mail. machine_name% su Password: The command to remove a file is rm filename. Read Chapter 6 in the User's Guide. A cache is a copy that is stored locally. Do not save the file. Symbol Conventions The following table explains symbols that might be used in this book. Symbol Description Example Meaning [ ] Contains optional arguments and command options. ls [-l] The -l option is not required. { } Contains a set of choices for a required command option. ${ } Indicates a variable reference. - Joins simultaneous multiple keystrokes. + Joins consecutive multiple keystrokes. > Indicates menu item selection in a graphical user interface. -d {y n} The -d option requires that you use either the y argument or the n argument. ${com.sun.javaroot} Control-A Ctrl+A+N File > New > Templates References the value of the com.sun.javaroot variable. Press the Control key while you press the A key. Press the Control key, release it, and then press the subsequent keys. From the File menu, choose New. From the New submenu, choose Templates. Default Paths and File Names The following table describes the default paths and file names that are used in this book. Placeholder Description Default Value as-install Represents the base installation directory for GlassFish Server. In configuration files, as-install is represented as follows: ${com.sun.aas.installroot} Installations on the Oracle Solaris operating system, Linux operating system, and Mac OS operating system: user's-home-directory/glassfish3/glassfish Installations on the Windows operating system: SystemDrive:\glassfish3\glassfish xviii

19 Placeholder Description Default Value as-install-parent Represents the parent of the base installation directory for GlassFish Server. domain-root-dir domain-dir instance-dir Represents the directory in which a domain is created by default. Represents the directory in which a domain's configuration is stored. In configuration files, domain-dir is represented as follows: ${com.sun.aas.instanceroot} Represents the directory for a server instance. Installations on the Oracle Solaris operating system, Linux operating system, and Mac operating system: user's-home-directory/glassfish3 Installations on the Windows operating system: SystemDrive:\glassfish3 as-install/domains/ domain-root-dir/domain-name domain-dir/instance-name Documentation, Support, and Training The Oracle web site provides information about the following additional resources: Documentation ( Support ( Training ( Searching Oracle Product Documentation Besides searching Oracle product documentation from the Oracle Documentation ( web site, you can use a search engine by typing the following syntax in the search field: search-term site:oracle.com For example, to search for "broker," type the following: broker site:oracle.com Documentation Accessibility For information about Oracle's commitment to accessibility, visit the Oracle Accessibility Program website at Access to Oracle Support Oracle customers have access to electronic support through My Oracle Support. For information, visit or visit if you are hearing impaired. xix

20 xx

21 Part I Part I Development Tasks and Tools

22

23 1 1Setting Up a Development Environment This chapter gives guidelines for setting up an application development environment in the Oracle GlassFish Server. Setting up an environment for creating, assembling, deploying, and debugging your code involves installing the mainstream version of the GlassFish Server and making use of development tools. In addition, sample applications are available. The following topics are addressed here: Installing and Preparing the Server for Development High Availability Features Development Tools Sample Applications Installing and Preparing the Server for Development For more information about GlassFish Server installation, see the GlassFish Server Open Source Edition Installation Guide. The following components are included in the full installation. JDK GlassFish Server core Java Platform, Standard Edition (Java SE) 7 Java EE 7 compliant application server Administration Console asadmin utility Other development and deployment tools Open Message Queue software Java DB database, based on the Derby database from Apache ( Load balancer plug-ins for web servers The NetBeans Integrated Development Environment (IDE) bundles the GlassFish edition of the GlassFish Server, so information about this IDE is provided as well. After you have installed GlassFish Server, you can further optimize the server for development in these ways: Setting Up a Development Environment 1-1

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